Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2699 ATGAGCTCCAATTTAGAGATGATAAGGAACAAGTTTACAGTGGAGAGGTCCAATAATGAAAGTGATGATCGTCAAGGAACAATCTCCACTAATCCTTTTTTCACTGAGAGCTTTTGTGTTGAAAAGTTTGATCATTTTAATGAAATTCCAAGCTATGTTCCAGCTGCTCTTTACTCCTCAGTATCTGCAAATAGCTCTTTATTTCCTCCATTTAACAGAGAAAATTCCAAGTGCTTGGGAGGAAGAAAGAGGAAAATAGAAAATGAAAGGGATGAGGAGAAGCAAAAGGAAGTGATTCATGTGAGAGCAAAAAGAGGCCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTAAGAAGAGAGAAAATAAATCAGAGGATGAAATTCTTACAGGATTTGGTTCCAGGATGCTACAAGACAATGGGAATGGCAGTAATGTTTGATGTGATCATAAATTACATCCAATCACTGCAGAATCAAATCGAATTCCTCTCCATGAAGCTTTCAGTTGCGAGTCGCTACTATGACTTCAACAACAGCTCCGAGACTGATGGCATTGAGATAATGCAGGCAACAACAAATGGGTATGATGTTATGCAAGAGATGGAGATGATTGTACTTAGAGAAGAAGAAGGGTATGGAGGGCCCTGTTACCACCACTCTACTTTGCCACCTCTCTAA 681 39.5 MSSNLEMIRNKFTVERSNNESDDRQGTISTNPFFTESFCVEKFDHFNEIPSYVPAALYSSVSANSSLFPPFNRENSKCLGGRKRKIENERDEEKQKEVIHVRAKRGQATDSHSLAERVRREKINQRMKFLQDLVPGCYKTMGMAVMFDVIINYIQSLQNQIEFLSMKLSVASRYYDFNNSSETDGIEIMQATTNGYDVMQEMEMIVLREEEGYGGPCYHHSTLPPL 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 74908893 74913215 + Hsped.02g26990.1 Hepe02g2699 564200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2699 226 Gene3D - 103 175 IPR036638 GO:0046983(InterPro)
Hepe02g2699 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 157 IPR011598 GO:0046983(InterPro)
Hepe02g2699 226 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 75 183 IPR024097 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Hepe02g2699 226 SMART finulus 113 163 IPR011598 GO:0046983(InterPro)
Hepe02g2699 226 Pfam Helix-loop-helix DNA-binding domain 111 157 IPR011598 GO:0046983(InterPro)
Hepe02g2699 226 CDD bHLH_AtBPE_like 97 181 - -
Hepe02g2699 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 105 176 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2699 Hepe-Chr2:74908893 Hepe05g1307 Hepe-Chr5:61222815 3.17e-32 dispersed
Hepe02g2699 Hepe-Chr2:74908893 Hepe07g2392 Hepe-Chr7:68266336 1.75e-44 wgd
Hepe02g2699 Hepe-Chr2:74908893 Hepe09g0348 Hepe-Chr9:3058840 5.15e-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55120 PF00010 HLH 0.00012 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2699 - - - 0.0