Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2703 ATGATTTTCTCCGACAAAATGCAAGAAATTGCATCCAAAATGGGCTTCACTCATCTCTCTGATTTCGCCGACACTCTGGAACAAGAACGCCGCAAAGTCCTCATGTTTCAGCGCGAACTCCCTCTCTGTTTGGAGATCGTTATCCACGCCATTGATTGTTGCAGGCATCAGCTATCGGAGACGACCACGGAGAATCATCAATCGGACTGCTCCGAGCAGACTTCCACCGAGATGGGTCCGGTTCTTGAGGAGTTCATTCCCATCAACAGAAATGGAGTCTCTGATTTTGAGCAACGGCACTCTCCTCCAGCTCAATCCGAGAACAATATCGACTCTGATCAAACCAATTTCAATTTGGGTCCGTCGGATTGGCTCAGATCTGCTCAGCTTTGGAATCAGACCTCAGATCCTCTTCCCCTCAATCAGGACTTGCCGGAGAAGACGCCGGTTGTCGAGGTCCAGAGAAATGGCGGTGCTTTCCGGCCGTTTCAGAAGGATAAAACTAGTGGCAGCGGCGGAGGAGGAGGGACGTCGTCGTCTTCCGCTCCGGCGGCTGCGGCGACGAGCTCAACCACGGAGACGGGGTCCGGCGGAAGCAGCCGACGGGAAGAGAAGGAAGCACAGAATCAGAGGAAACTGAGACGGTGCTGGTCGCCGGAGCTGCACCGGCGGTTCCTTCATGCGCTTCAGCAGCTCGGAGGCTCCCATGTGGCGACGCCGAAGCAAATAAGAGAATTGATGAAGGTAGATGGTCTTACCAACGACGAAGTGAAAAGTCATCTGCAGAAGTATCGGCTGCACACGAGACGGCCAAGTCCGACGATCCACAACAACGAGAGTGGCCAAGCGCCGCAGTTCCTGGTGGTCGGCGGCATATGGGTACCGGCGGCCGAGTACGCCGCCGTTGCCGCTACCACGTCTTCCGGAGAAGCGGTCAGCGCCGCCACCACAAACGGAATTTATGCACCGCCGCCGCCATTAGTTAGTACAATCCAAAAGCCGAAGCCCAGGGTTTGTTCCGCCGCGGCCGAGTGTAATTCTCCTACTACATCTTCCTCCACTCATACGTCTTCAGTTTCACCTACTTTGTGA 1092 54.95 MIFSDKMQEIASKMGFTHLSDFADTLEQERRKVLMFQRELPLCLEIVIHAIDCCRHQLSETTTENHQSDCSEQTSTEMGPVLEEFIPINRNGVSDFEQRHSPPAQSENNIDSDQTNFNLGPSDWLRSAQLWNQTSDPLPLNQDLPEKTPVVEVQRNGGAFRPFQKDKTSGSGGGGGTSSSSAPAAAATSSTTETGSGGSSRREEKEAQNQRKLRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTIHNNESGQAPQFLVVGGIWVPAAEYAAVAATTSSGEAVSAATTNGIYAPPPPLVSTIQKPKPRVCSAAAECNSPTTSSSTHTSSVSPTL 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75013252 75016387 + Hsped.02g27030.1 Hepe02g2703 564204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2703 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 331 IPR044787 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2703 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 209 269 IPR017930 -
Hepe02g2703 363 FunFam Myb family transcription factor 211 269 - -
Hepe02g2703 363 MobiDBLite consensus disorder prediction 344 363 - -
Hepe02g2703 363 MobiDBLite consensus disorder prediction 170 197 - -
Hepe02g2703 363 MobiDBLite consensus disorder prediction 93 121 - -
Hepe02g2703 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 212 267 IPR006447 GO:0003677(InterPro)
Hepe02g2703 363 MobiDBLite consensus disorder prediction 198 215 - -
Hepe02g2703 363 MobiDBLite consensus disorder prediction 94 121 - -
Hepe02g2703 363 Pfam Myb-like DNA-binding domain 214 265 IPR001005 -
Hepe02g2703 363 MobiDBLite consensus disorder prediction 156 215 - -
Hepe02g2703 363 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Hepe02g2703 363 Gene3D - 211 269 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2703 Hepe-Chr2:75013252 Hepe08g2569 Hepe-Chr8:67330577 3.80e-47 dispersed
Hepe01g1219 Hepe-Chr1:77366530 Hepe02g2703 Hepe-Chr2:75013252 3.71e-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55121 PF00249 Myb_DNA-binding 1.60E-06 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2703 - - - 0.0