Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2705 ATGAAAAGTCTGATTCTCTATTTGCTTCTTCAAACAAAAAACAATTTGTTTAATACACAGAAACACCTTTCTGCACTCCTATTACTGATACGCTATCCTCTTCTTAAAAACATACATCAAAAAGATTTTCTTCCACTGCACTTCGATTGCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTCTTTACTGAATTTGCTTTCAATTTCCTCCTTATTTTCTTGTTTGTTTCCTGAGAAAGACAAAGAATTTGATCCCCAAAAAAAAATGCAGAGCTTTGAAAACCCAGAACAGTTCTTTGCCCATTCTTCTTCTTCTTCTTCCATCTTTCTCCGGGGAGACGACAATGGACGAATCCATACGCGTTTTCTTCCGGATATTGAGGAGCTTCATCAATCCGCTGCTGCTTTTCATCACGATGATGCTGTTGATTTAAGCCCAAGCTCTGTTTTCGGTTTAAAATCGACCCATAATCACAACACAGCTTTTCCAATCCACCAACCGTATTCGAGCGCGGATTTGGGTTCAATAGGAGCAGGGTATTTAGACACGGGACATCAATTGATGCGGTTGAAGAGGCTGGCTCCGCCGCAGACGGCGGCTGTGACGGTGGCGGCTGCGTCATCGTTGGGAAATGGGAGCTTTGAGAACTGGGGAGAGTCAGCCATGGCAGATAATAGCCAGCAGACTGACACTTCCACAGACATTGACAATGATGAAAGAAACCAGTTTCATGGAGCTGCACATGGAGCTCTCATGGCGGTGGACTCCATGGATCAATCTAAACCGAAATCTGCAGATCAAAAGACTCTTCGTAGGCTTGCTCAGAATCGAGAAGCAGCTAGGAAAAGTCGACTGAGGAAGAAGGCATATGTCCAGCAGCTGGAAAGCAGTCGACAGAGGCTTACGCAGCTAGAGCAGGAGCTTCATCGAGCACGCCAGCAGCACCAGGGCGTTTTTGTGGCTTCTGGGGCAGGAGAGCATTGTTTATCAATGGCAGGAAATGGTGCCTTGGCATTTGATCTTGACTATGCACGGTGGCTTGATGAGCATCAACGGCTGATCAATGATTTGAGAGCATCTGCAAATTCTCAATTGGGCGATGACGAATTGCGATTTCTTGTTGATGGGGTGATGGCACATTATGATGACCTCTTCAGGCTGAAGAGCATAGGTGCCAAGGCCGACGTATTCCACATTCTTTCGGGCATGTGGAAGACTCCTGCTGAGAGGTGTTTCATGTGGCTGGGAGGATTCCGTTCGTCTGAACTTCTAAAGATAGTTGGGAGCCATTTGGAGCCTTTAACAGATCAGCAGTTGATGGGTATATGCAATTTGCAGCAATCTTCCCAACAAGCTGAAGATGCATTGTCACAAGGGATTGAAGCTTTGCAACAATCTCTTGTAGAAACTCTTTCCACTGCTTCTTTAGGTCCAGCCAGTTCGGGAAATGTCGCTGATTACATGGGCCAAATGGCGATTGCAATGAGCAAGCTAACGACGCTTGAGAACTTTCTACATCAGGCTGATCTTCTGAGGCAGCAAACTATCCAACAGATGCATCGGATATTAACTACTCGTCAAGCTGCACGAGCGCTTCTTGTCATCAGCGATTACATTTCACGACTCCGAGCTCTCAGTTCTCTGTGGTTAGCACGACCAAGAGAATGA 1668 45.56 MKSLILYLLLQTKNNLFNTQKHLSALLLLIRYPLLKNIHQKDFLPLHFDCFLSFFLSFFFSLLNLLSISSLFSCLFPEKDKEFDPQKKMQSFENPEQFFAHSSSSSSIFLRGDDNGRIHTRFLPDIEELHQSAAAFHHDDAVDLSPSSVFGLKSTHNHNTAFPIHQPYSSADLGSIGAGYLDTGHQLMRLKRLAPPQTAAVTVAAASSLGNGSFENWGESAMADNSQQTDTSTDIDNDERNQFHGAAHGALMAVDSMDQSKPKSADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRQRLTQLEQELHRARQQHQGVFVASGAGEHCLSMAGNGALAFDLDYARWLDEHQRLINDLRASANSQLGDDELRFLVDGVMAHYDDLFRLKSIGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGSHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSTASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTIQQMHRILTTRQAARALLVISDYISRLRALSSLWLARPRE 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75059374 75062548 + Hsped.02g27050.1 Hepe02g2705 564206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2705 555 MobiDBLite consensus disorder prediction 255 288 - -
Hepe02g2705 555 Pfam bZIP transcription factor 267 308 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2705 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 266 310 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2705 555 Pfam Seed dormancy control 354 427 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe02g2705 555 SUPERFAMILY Leucine zipper domain 268 316 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2705 555 MobiDBLite consensus disorder prediction 261 280 - -
Hepe02g2705 555 MobiDBLite consensus disorder prediction 215 240 - -
Hepe02g2705 555 ProSiteProfiles DOG1 domain profile. 336 552 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe02g2705 555 CDD bZIP_HBP1b-like 268 314 - -
Hepe02g2705 555 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 271 286 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2705 555 MobiDBLite consensus disorder prediction 215 232 - -
Hepe02g2705 555 Gene3D - 267 318 - -
Hepe02g2705 555 SMART brlzneu 264 324 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2705 555 PANTHER TRANSCRIPTION FACTOR TGA9 224 555 - -
Hepe02g2705 555 Coils Coil 287 314 - -
Hepe02g2705 555 FunFam BZIP family transcription factor 267 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2705 Hepe-Chr2:75059374 Hepe10g0543 Hepe-Chr10:6451084 7.81e-140 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55122 PF14144 DOG1 5.40E-29 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2705 K14431 - csv:101210308 801.586