Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2711 ATGGAGAATCCATCCTCAAACAAACGCCTCCGATTCGACTCACCCGACTCCGAATCCGACTCACCGGAGGTCAAGCGCCTCAAAGCCGACCTCCTCGTCCTTCTCGACGACGCCGACCCCGATCCCACCGTCCACGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCCTTCCCGGCCCCCGCCGACTCCCTCCCGGAGCTAGGCTACCTTCTCCTGGCCTCCGACGACGAGCTCGGCCTCCCCCCGTCAGACGCCTCCACCAGCCACGGCAGCCAAACGGATGTCGCCGAACTAGCGCGCGCGTCGTCCGGGATCGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTATGAGTCGTTTGGGTTGGGGGAAGGAGAGAGATTTTACAGCGAGACGGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCCTGA 471 59.45 MENPSSNKRLRFDSPDSESDSPEVKRLKADLLVLLDDADPDPTVHDLDSVIQSFADEISPFPAPADSLPELGYLLLASDDELGLPPSDASTSHGSQTDVAELARASSGIGEIWGFEDAIPSYESFGLGEGERFYSETEYVAFDGLFEHSDVYSVFS 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75170553 75171586 - Hsped.02g27110.1 Hepe02g2711 564212

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2711 156 PANTHER T6J4.11 PROTEIN 4 150 - -
Hepe02g2711 156 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2711 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2711 Hepe-Chr2:75170553 Hepe09g0336 Hepe-Chr9:2934541 2.88e-17 dispersed
Hepe01g1199 Hepe-Chr1:77185049 Hepe02g2711 Hepe-Chr2:75170553 4.44e-39 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g244 . . . . Bpe02g00056 . . . Cmo04g02487 Cmo15g00675 . . . . Sed03g0420 . . Bhi04g01892 Tan11g1257 Cmetu03g1930 . Hepe02g2711 . Lcy10g1238 Cla08g00608 Cam08g1021 Cec08g0611 Cco08g0722 Clacu08g0732 . Cre08g0540 . . Cone17ag1292 Cone20ag0436 . . . Cme03g00527 . Blo18g00180 Bda11g00726 Bda13g01478 . Bpe14g00388 Bma01g00807 Bma02g00213 . . . . . Car04g02301 Car15g00613 Cpe01g02062 . . . . . . . . . . . . . . . Lsi08g00447 . Chy03g00359 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001339 6 2 4 3 3 2 4 2 2 2 2 2 4 2 2 4 2 4 3 2 2 2 2 2 2 0 2 3 2 1 75