Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2725 | ATGCAAAGTTCAAACTTCACTTGCATATCATCAAGCGAGAGCGCGTGTTTGGAGGCTGATGAAGAAGGAGAAGACTCCATTTTCCTTTCACTCTGTCCTCCAGGCCAACGCCACTCAATTTCTTCCAAACATCCGCCCATTTGCCCTAATAACTCCTCTCTCCAAAACCCTAATATTATTCATCATCATCAAGATCATGCTGCTGTCACCGTCGCAATGCATATCGGCCCCCCTCCCATCTCCGCCGCCACCGCCACCGCCGCCGACTCAAACGACCTTGCTGCCGTCCGACCGGTTGACGGCCAGTACTGGATCCCTACGCCTGCCCAAATCCTTGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCACAGTACAGAAAAGGGCCAGAGTCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTTAGACTTCCATGCTATTGCTGTGCAGAGGGTTGCAAAAACAACATAGATCATCCAAGGTCAAGGCCATTGAAAGACTTTAGGACACTTCAAACCCATTACAAGAGAAAGCATGGGGCAAAGCCCTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTTAGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTAGGGCCTTTGGGGATGGCCATGCACCTCATACTGTCCAACTTTGTGACCTTGAAGAGGATGATTGGGATGATCATCATGATGATCATCAACATATAAATGCATCAAGTCAACCCTGGTCAATTTATCATTAA | 873 | 47.42 | MQSSNFTCISSSESACLEADEEGEDSIFLSLCPPGQRHSISSKHPPICPNNSSLQNPNIIHHHQDHAAVTVAMHIGPPPISAATATAADSNDLAAVRPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCDLEEDDWDDHHDDHQHINASSQPWSIYH | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 75570150 | 75571599 | - | Hsped.02g27250.1 | Hepe02g2725 | 564226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2725 | 290 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 120 | 140 | IPR013087 | - | |
Hepe02g2725 | 290 | FunFam | zinc finger protein WIP2-like | 117 | 140 | - | - | |
Hepe02g2725 | 290 | SUPERFAMILY | beta-beta-alpha zinc fingers | 114 | 140 | IPR036236 | - | |
Hepe02g2725 | 290 | Gene3D | Classic Zinc Finger | 149 | 228 | - | - | |
Hepe02g2725 | 290 | SUPERFAMILY | beta-beta-alpha zinc fingers | 186 | 223 | IPR036236 | - | |
Hepe02g2725 | 290 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 202 | 226 | - | - | |
Hepe02g2725 | 290 | PANTHER | ZINC FINGER PROTEIN WIP2 | 13 | 276 | IPR043584 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(PANTHER)|GO:0010468(InterPro)|GO:0048856(PANTHER) | |
Hepe02g2725 | 290 | SMART | c2h2final6 | 118 | 140 | IPR013087 | - | |
Hepe02g2725 | 290 | SMART | c2h2final6 | 203 | 223 | IPR013087 | - | |
Hepe02g2725 | 290 | SMART | c2h2final6 | 166 | 198 | IPR013087 | - | |
Hepe02g2725 | 290 | Gene3D | Classic Zinc Finger | 117 | 140 | - | - | |
Hepe02g2725 | 290 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 118 | 145 | IPR013087 | - | |
Hepe02g2725 | 290 | FunFam | Zinc finger protein WIP2 | 172 | 254 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2725 | Hepe-Chr2:75570150 | Hepe05g0565 | Hepe-Chr5:7947960 | 1.72e-106 | dispersed | |
Hepe02g2725 | Hepe-Chr2:75570150 | Hepe08g0113 | Hepe-Chr8:959454 | 5.83e-107 | transposed | |
Hepe02g2725 | Hepe-Chr2:75570150 | Hepe04g0273 | Hepe-Chr4:46967259 | 9.84e-108 | transposed | |
Hepe02g2725 | Hepe-Chr2:75570150 | Hepe04g0308 | Hepe-Chr4:48818921 | 9.84e-108 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55125 | PF00096 | zf-C2H2 | 0.012 | CL0361 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2725 | - | - | - | 0.0 |