Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2731 ATGGTGGTGGAGACTCGAGTTTTGACATGGAGCAGAGGGATCAAGTCCCTCCAAGCTCTAGCAGCCCATGGTTTTCTTTTTTCCTTCACGCTTTTGCTTGCTTTCAAGCTTGACCGTGTCTTCTCCTACTCTTGGTGCATTGTCTTTTCACCTTTATGGCTTTTTCATCTGGTTGCAGCAAGAGGCAGATTCTCTCTACCGGCTCCATCAATGCCTCATGACCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCTTTCGAAGTACTTCTTTGTATATATTTAGAGAGCAGTAATGTTATAAATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGCTGGCAATTTTGGTCGATAATATCAGGATGTGTAAAGCCTTACTTCCTGGAGACGAAGAAGAAAATGTTAGCGATGAAGTTATATGGGAAACACTTCCTCACTTCTGGGTCTCAATCTCCATGGTTTTCTTCATTGCTGCAACCCTGTTCACTCTTCTAAAGCTTTGTGGCAATGTAGCTGCTCTGGGCTGGTGGGATTTATTTATAAATTTCAGTATAGCTGAGTGCTTTGCATTTCTTGTTTGCACGAAGTGGTATAATCCTATGATTCATAGGCACTCTCTTGTTAGAGAATCAAGTTCTTCTTCGCTGACTATTAGATACCTTGACTGGGATAGAGGTGTGGTGGTTTCCTCTGATGAGGCTCAACCCCAAGTCAGAGTTTGTAACCTGCAGGACATTGGTGGTCACATCATGAAGGTTCCTTTAATCGTTTTCCAAATCATGCTTTTTATGCGCTTAGAGGGAACCCCAAGGAGTGCTTCATATATTCCTTGTCTGTTTCTGTTCTCTCCTCTTTTCTTACTGCAAGGAGTAGGTTTTGTATTTGCAGCATATAGGTCGATGGAAAAAATTATAATTTTACTAGTTGGTGCTCCTACTTCTGTAAGATATCTTGACCTAAGGTCAAAGGGTCGTGAACTTTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATGGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGATCTTCTGGGTATGATACTTTCACACCAGATACTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGATATGGAGATTACAAGCTTCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGGCAGGAGCACGAAAAACTTCTAAATGACAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCTTGTAGGCATTACATTCTCTGCAGCTCTTGTTGTGAGAAGTGTAATCGGTGCCCGATCTGTCGGGAATCTATCGAAGAACGGGTGCCTGTAAATGATGTTTAG 1404 41.95 MVVETRVLTWSRGIKSLQALAAHGFLFSFTLLLAFKLDRVFSYSWCIVFSPLWLFHLVAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLESSNVINLKIVFVPLMIFELAILVDNIRMCKALLPGDEEENVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLCGNVAALGWWDLFINFSIAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEAQPQVRVCNLQDIGGHIMKVPLIVFQIMLFMRLEGTPRSASYIPCLFLFSPLFLLQGVGFVFAAYRSMEKIIILLVGAPTSVRYLDLRSKGRELLGFMHHGSRLLGWWSMDEGSQEEQAKLYSAGSSGYDTFTPDTVKKMTKSNLVDEIWRLQASLNQQTEVTKLSRQEHEKLLNDKILCRVCFDEPIDMVLLPCRHYILCSSCCEKCNRCPICRESIEERVPVNDV 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75713266 75725217 - Hsped.02g27310.1 Hepe02g2731 564232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2731 467 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 9 467 - -
Hepe02g2731 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 464 IPR013083 -
Hepe02g2731 467 Pfam Transmembrane Fragile-X-F protein 36 295 IPR019396 -
Hepe02g2731 467 ProSiteProfiles Zinc finger RING-type profile. 420 455 IPR001841 -
Hepe02g2731 467 Pfam Zinc finger, C3HC4 type (RING finger) 418 460 - -
Hepe02g2731 467 SUPERFAMILY RING/U-box 411 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2731 Hepe-Chr2:75713266 Hepe09g0326 Hepe-Chr9:2861426 2.89e-225 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2731 - - - 0.0