Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2732 ATGAAGGAGGAAGGAGAGTGTTTTCAAGGGTTTCAAGAGCAACTTCTTCTAATGCAACAATTCCAAACGATGCAACAAAACGGCGACGTTTTCGGTGTCGGTGTCGGTGTCGGTGTCGGTGGAGGAGGAGGAGGAGGAGGAGGGTTGATTTATCCTGATCATGTTTCTCCGATGATGTTTCCGCCACCGTGGACGGCGATGACAACCCTCCCTCAAGTCCACCACGACCCGTTTATCCCGCCGCCGCCGCCATCTTCCTACGCCAGCTTCTTCAACAGGAACAATAATCTTGGAATTGGGCAGATGGGTCAGGTTGGGTCTGTCCCATTTGGGCTGCAGGCGGAGCTGACCAAGATGACCGCTCAAGAAATAATGGATGCCAAAGCACTTGCAGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTAAGAAGCTTACTCCCAAGCACCACAAAAACCGACAAGGCATCGTTGCTAGCAGAAGTAATCCAACATGTGAAAGAGCTAAAACGACAGACGACATTGATAGCCGACGTAAGTCCAGTGCCGACCGAGCTCGACGAGCTATCGGTGGACGTCGACGCCTCGGATGAGGACGGGAAGTTTGTGATCAAAGCATCGCTTTGTTGCGAGGATAGGTCTGATCTTTTGCCACAGATCATCAAAACCCTGAAATCCCTTCGCCTGAGAACCCTAAAAGCGGAGATTACCACGCTCGGCGGCCGCGTAAAGAACGTCTTGTTCATCACCAGCGACGACGACTACTACTCGTCTTCATCAAGCGAGCAACAAGAGCCTCCACAGAACCACCACCAATACAGCATCAGCTCCATTCAGGAAGCCCTAAAGGCCGTTATGGAAAAGGTGTGTAGTAGTGAAGATCAGTCGTCTTCAGGCAGCATTAAAAGACAAAGGACGAATAATAATCACAACAACAACAACATTAATATCATCGAACAACATCAACAACATCAACAACACAGGTCTCTCTAG 1026 49.03 MKEEGECFQGFQEQLLLMQQFQTMQQNGDVFGVGVGVGVGGGGGGGGGLIYPDHVSPMMFPPPWTAMTTLPQVHHDPFIPPPPPSSYASFFNRNNNLGIGQMGQVGSVPFGLQAELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITSDDDYYSSSSSEQQEPPQNHHQYSISSIQEALKAVMEKVCSSEDQSSSGSIKRQRTNNNHNNNNINIIEQHQQHQQHRSL 341
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 75742883 75745435 - Hsped.02g27320.1 Hepe02g2732 564233
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2732 341 CDD bHLH_AtAIG1_like 126 205 - -
Hepe02g2732 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 185 IPR036638 GO:0046983(InterPro)
Hepe02g2732 341 Gene3D - 126 186 IPR036638 GO:0046983(InterPro)
Hepe02g2732 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983(InterPro)
Hepe02g2732 341 SMART finulus 137 186 IPR011598 GO:0046983(InterPro)
Hepe02g2732 341 FunFam transcription factor bHLH30 126 189 - -
Hepe02g2732 341 MobiDBLite consensus disorder prediction 304 324 - -
Hepe02g2732 341 PANTHER TRANSCRIPTION FACTOR BHLH30 102 319 IPR045847 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2732 341 Pfam Helix-loop-helix DNA-binding domain 134 181 IPR011598 GO:0046983(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2732 Hepe-Chr2:75742883 Hepe07g1874 Hepe-Chr7:62254359 1.10e-35 dispersed
Hepe05g0856 Hepe-Chr5:24791374 Hepe02g2732 Hepe-Chr2:75742883 9.78e-45 transposed
Hepe01g1224 Hepe-Chr1:77463147 Hepe02g2732 Hepe-Chr2:75742883 1.05e-91 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55127 PF00010 HLH 1.60E-12 No_clan Hepe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2732 - - - 0.0