Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2737 ATGGCAATGGATTCAAGTACCCCATTGTTGCTCTTCTCCTCTCAATCAGAGCCTCAACACCAAACTTCCCAATCAAACAAAACCCTCTTCGTACCTTCCAAATTCATTTGGCCAAAAGGAGATTTAGTAAACGCTCATCATAACTTCACCGAACCACATGTTGACCTTAACGGCTTCCTTAAGGGCGATAAAAAGGCAACCATCCAAGCCTCCAACCTCGTAAGGAAAGCCTGCTTGAAACATGGCTTCTTCCAAGTCATCAACCACGGCGTTGATCATGATCTCTTGGCCACTGCCCTTGATAAAATGGCCTCTCTTTTTAACCTCCCTTTGAACCTTAAGACTAGGGCTTCCCATGCCCACCCTGCCAAAATGTGGGGCTTTTCCACTGCTCATTCTAATCGCTTTTCATCAAAGCTGCCATGGAAGGAAACTTTCTCCTTTGGATTTGACCATTATTGTTGCAATAGCTCCTCCAATGAACCAGCTGTGGTTGATTTCTTCTCTTCCACTCTAGGCAAGGAATTTGAAGAAATAGGGCTTGTATATGAAAAGTACTGCGAAGCAATGAGGGACCTGTCACTTGCATTAACGGAGCTTTTAGCCATAAGCTTAGGCGTGGAAAGGTCGCATTTTCGGAAGTTTTTCGAAGATGGAAGCTCAATAATGCGATTGAACAGCTACCCAATTTGCCAAGAAGGCGGCGTGGCTCTGGGGACTGGGCCTCACTGTGACCCAACAGGCTTGACCATCCTCCACCAGGACCAGGTCGGTGGCCTCGAAGTATTTGCCAACAACAAATGGCACACCGTTCCCCCCTCTCCAAATGCACTTGTGGTTAACATTGGTGACGCATTGTGCAATGGGGAATACAAAAGCTGCGTGCATAGGGCGGTGGTGAACAAGCACAAGGAGAGGAGGTCGTTGGCATTTTTCCTTTGTCCAAAGAAAGACAAGATGGTGAGGCCGCCGGAGAATCTCGCCGGCAGCGATGGGTCGAGAAAGTACCCGGATTTCGCCTGGTCGGAGCTGCTTGAATTCACTCAGAAATACTACAGAGCCGATGCTATAACTCTTCAAAACTTCACCAAATGGGTTGAGTCGTCGAGACCCTGTGATCTTTAG 1125 47.73 MAMDSSTPLLLFSSQSEPQHQTSQSNKTLFVPSKFIWPKGDLVNAHHNFTEPHVDLNGFLKGDKKATIQASNLVRKACLKHGFFQVINHGVDHDLLATALDKMASLFNLPLNLKTRASHAHPAKMWGFSTAHSNRFSSKLPWKETFSFGFDHYCCNSSSNEPAVVDFFSSTLGKEFEEIGLVYEKYCEAMRDLSLALTELLAISLGVERSHFRKFFEDGSSIMRLNSYPICQEGGVALGTGPHCDPTGLTILHQDQVGGLEVFANNKWHTVPPSPNALVVNIGDALCNGEYKSCVHRAVVNKHKERRSLAFFLCPKKDKMVRPPENLAGSDGSRKYPDFAWSELLEFTQKYYRADAITLQNFTKWVESSRPCDL 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75852635 75855430 - Hsped.02g27370.1 Hepe02g2737 564238

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2737 374 PRINTS Isopenicillin N synthase signature 74 91 - -
Hepe02g2737 374 PRINTS Isopenicillin N synthase signature 243 264 - -
Hepe02g2737 374 PRINTS Isopenicillin N synthase signature 303 321 - -
Hepe02g2737 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 219 315 IPR005123 -
Hepe02g2737 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 152 IPR026992 -
Hepe02g2737 374 FunFam Gibberellin 20 oxidase 2 22 353 - -
Hepe02g2737 374 SUPERFAMILY Clavaminate synthase-like 26 354 - -
Hepe02g2737 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 32 345 IPR050231 GO:0009416(PANTHER)|GO:0009686(PANTHER)|GO:0009826(PANTHER)|GO:0009908(PANTHER)|GO:0016706(PANTHER)|GO:0045544(PANTHER)
Hepe02g2737 374 Gene3D - 13 347 IPR027443 -
Hepe02g2737 374 Pfam 2OG-Fe(II) oxygenase superfamily 221 315 IPR044861 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2737 K05282 - - csv:101209625 614.764
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2737 Hepe-Chr2:75852635 Hepe04g1088 Hepe-Chr4:65552051 2.18e-143 dispersed
Hepe02g2737 Hepe-Chr2:75852635 Hepe09g1280 Hepe-Chr9:17584327 2.20e-99 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g197 . . . . . Bpe04g00544 . . . . . . . . Sed01g0939 . . Bhi04g01851 Tan11g1219 Cmetu03g0027 . Hepe02g2737 . . Cla08g00640 Cam08g1059 Cec08g0644 Cco08g0755 Clacu08g0766 . Cre08g0572 . . . . . . . Cme03g00462 . . . . . . . . . . . . . . Car15g00590 . . . . . . . . . . . . . . . . Lsi08g00487 . Chy03g00549 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014001 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 24