Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2738 ATGGGGCGTCCAACTGAGACGCTTATTCGATTCACAGTGCTGAACATAGCCATCTTAATATCATCAGCTTTTGTAGCGTCGGCAGCGAATACGACGGTGGTGGTAGCTTCTCAAGCCTTACCCGGGTGCGACGAATGGTGCGGCGACGTGCGAATTCCATATCCATTCGGCACGAGGGAAGGGTGTTATCTGAATGAAAATTTCTTCATCGAGTGTAACACAACTCATTACGATTCTCCAAAGGCATTTCTAGAGGGCGGCAACCTTAACGTTACAAACATACTCATCTCCGGGGAGCTTCAAATCTTGCACTTCGTGGCCCGAGATTGCTACCCGAAAATGAACAATGGTCTCGATGATGATTCATCCAGCATGTTTCTCAACGTGCCTACTTACACAATCTCCAGTACCAAAAACAAGTTCACCGTTATCGGCTGCGATACATACGCTTATATTTTCGGCCAACAACTCGACGGCCAAACCTTCAAAACTGCATGCGTGGCGCTGTGTGATGACATTACAACAGTACGAGATGGGGCTTGCTCTGGCAATGGCTGCTGTCAGTTGGAGATTCCCAACGGTCTTAACTATTTGGAGTACGAGGTGCACAGCTTAAACAATCACACTAATGTCTCCAGTTTCAATCCTTGTGGGTATGCCTTTGTAACTGAAGAAGACAACTTCAATTTCTCGTCCGCGTATATTCGCAACTTTCCACAAGAGAGAATTTCATCGGTGCTTGATTGGGCCATTAGTAACAATACTTGCTTGACGGCTGACAACAAAACTATAGCTAATTGTATATGTGGGTCAAATAGTAGAAAGCTTAACTTCCTTGCTGATGGATCTGAGTATCGTTGCCAGTGCTTGGAAGGATTTGAGGGGAATCCATATCTCCCTCAAGGTTGTCAAGATATCGATGAGTGCAAGGATGAAAAGCTGAATGACTGCAGGTTTGAGTGTGTTAACACAATAGGAAACTATATTTGCAATTGTCCCAAGGACTTTAAAGGAGATGGAAGACGTGGGGGAGAAGGTTGCACTCGAAACTCCAAGTCTTTCGTTCAAATCATCGTCGGAGTTACTGTGGGGTTCACAGTTTTATTGATTGGGAGTACATGGTTATACTTGGGCTACAGAAAGTGGAGGTTCATTCAACTGAAAGAGAAGTTTTTTGAGAAAAATGGAGGCTTGATGCTTCAACAACATCTTTCCCAATGGCAATTATCTACTGACATGGTCAGAATTTTCACCCAAGAGGAGCTGGACAAGGCTACAAACAAGTACGACGAAAGTGCAGTGGTCGGAAAAGGTGGCTACGGTACTGTTTACAAAGGAGTCTTAGACGACGGTTTGGTAGTCGCAATCAAGAAATCAAAATTAGTGGACCAATCCCAAACTTCCCAATTCATTAACGAAGTCATTGTTCTGTCCCAAATCAACCACCGGAACGTGGTCAAGCTCTTAGGATGTTGTTTAGAGAGCCAAGTTCCATTGTTGGTGTACGAGTTCATCACGAGTGGCACACTCTACGAACACATCCATGAAAAAACCAAATACGCTTCTCTTTCATGGGAAGTTCGGTTGAGAATAGCTGCAGAAACTGCAGGGGTCATTTCATATCTTCATTCTTCAGCTTCCACTCCAATTATCCACAGAGATATCAAGACGACTAACATACTTTTAGACGAGAATTACACTTCGAAGGTCTCTGATTTCGGTGCTTCCAAGTTGGTTCCTGTTGATCAAACTCAACTATCCACAATGGTGCAAGGGACTCTTGGATATTTAGACCCGGAATACTTGTTAACGAGTGAGCTGACGGAGAAAAGCGACGTGTACAGCTTTGGAATTGTGCTTCTAGAGCTTATCACCGGGAAAAAGGCGGTGAGTTTCGAGGGGCCGGAAGCGGAGAGGAACCTAGCCATGTACGTCCTGTGTGCGATGAAGGAGGATCGTTTGGAACAAGTTGTGGAGAAAGGAATGGCGACGGAAGCGAACTTTGAGCAGATAAAAGAAGTGGCTAAGTTGGGAAGAAGCTGCTTGAGAATAAGTGGGGAGGAGCGACCAAGCATGAAGGAGGTGGCCATGGAGTTGGAAGGGCTGAGAGTGATGACTGAGCATCAATGGGTTAATGTCAACTTAGCCAACAACACAGAAGAGATTGTGGCTTATTTGCTGCAGGATGGAGGTTTAGAAGCCACATCGTCGAACCAGTTTGTTGTGAGTGGGAGCACAAATCTTGTCGACGATAGCATGAAGCTCCACATTTTGCCACGGATCCATGATGGAAGATGA 2298 45.21 MGRPTETLIRFTVLNIAILISSAFVASAANTTVVVASQALPGCDEWCGDVRIPYPFGTREGCYLNENFFIECNTTHYDSPKAFLEGGNLNVTNILISGELQILHFVARDCYPKMNNGLDDDSSSMFLNVPTYTISSTKNKFTVIGCDTYAYIFGQQLDGQTFKTACVALCDDITTVRDGACSGNGCCQLEIPNGLNYLEYEVHSLNNHTNVSSFNPCGYAFVTEEDNFNFSSAYIRNFPQERISSVLDWAISNNTCLTADNKTIANCICGSNSRKLNFLADGSEYRCQCLEGFEGNPYLPQGCQDIDECKDEKLNDCRFECVNTIGNYICNCPKDFKGDGRRGGEGCTRNSKSFVQIIVGVTVGFTVLLIGSTWLYLGYRKWRFIQLKEKFFEKNGGLMLQQHLSQWQLSTDMVRIFTQEELDKATNKYDESAVVGKGGYGTVYKGVLDDGLVVAIKKSKLVDQSQTSQFINEVIVLSQINHRNVVKLLGCCLESQVPLLVYEFITSGTLYEHIHEKTKYASLSWEVRLRIAAETAGVISYLHSSASTPIIHRDIKTTNILLDENYTSKVSDFGASKLVPVDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVSFEGPEAERNLAMYVLCAMKEDRLEQVVEKGMATEANFEQIKEVAKLGRSCLRISGEERPSMKEVAMELEGLRVMTEHQWVNVNLANNTEEIVAYLLQDGGLEATSSNQFVVSGSTNLVDDSMKLHILPRIHDGR 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75877020 75880530 + Hsped.02g27380.1 Hepe02g2738 564239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2738 765 ProSiteProfiles Protein kinase domain profile. 429 711 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2738 765 ProSitePatterns Calcium-binding EGF-like domain signature. 305 330 IPR018097 GO:0005509(InterPro)
Hepe02g2738 765 FunFam Wall-associated receptor kinase 2 505 722 - -
Hepe02g2738 765 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 321 332 IPR000152 -
Hepe02g2738 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2738 765 SUPERFAMILY EGF/Laminin 304 340 - -
Hepe02g2738 765 FunFam Fibrillin 2 300 343 - -
Hepe02g2738 765 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524(InterPro)
Hepe02g2738 765 SUPERFAMILY Protein kinase-like (PK-like) 407 700 IPR011009 -
Hepe02g2738 765 CDD STKc_IRAK 435 702 - -
Hepe02g2738 765 SMART serkin_6 429 711 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2738 765 SMART egfca_6 305 348 IPR001881 GO:0005509(InterPro)
Hepe02g2738 765 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 712 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Hepe02g2738 765 CDD EGF_CA 305 339 - -
Hepe02g2738 765 Gene3D Phosphorylase Kinase; domain 1 400 504 - -
Hepe02g2738 765 FunFam Wall-associated receptor kinase 2 399 504 - -
Hepe02g2738 765 SMART egf_5 255 304 IPR000742 -
Hepe02g2738 765 SMART egf_5 308 348 IPR000742 -
Hepe02g2738 765 Gene3D Transferase(Phosphotransferase) domain 1 505 723 - -
Hepe02g2738 765 Pfam Protein tyrosine and serine/threonine kinase 434 699 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2738 765 Gene3D Plasmodium vivax P25 domain 244 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2738 Hepe-Chr2:75877020 Hepe02g2740 Hepe-Chr2:75906938 3.55e-126 dispersed
Hepe02g2738 Hepe-Chr2:75877020 Hepe02g2739 Hepe-Chr2:75889217 0.0 tandem
Hepe01g2383 Hepe-Chr1:88196568 Hepe02g2738 Hepe-Chr2:75877020 1.78e-112 transposed
Hepe03g0537 Hepe-Chr3:10085753 Hepe02g2738 Hepe-Chr2:75877020 0.0 transposed
Hepe10g1327 Hepe-Chr10:49198408 Hepe02g2738 Hepe-Chr2:75877020 2.03e-07 transposed
Hepe10g1945 Hepe-Chr10:56330880 Hepe02g2738 Hepe-Chr2:75877020 1.43e-239 transposed
Hepe01g1169 Hepe-Chr1:76830752 Hepe02g2738 Hepe-Chr2:75877020 2.36e-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72598 PF07714 PK_Tyr_Ser-Thr 8.10E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2738 - - - 0.0