Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2750 ATGTTCTCGAGAGATTCTAACGTTCTATTCAGTGGCGGCGGTATCAGTTTTGGAAGCAGTGAAACTTGCACATCTAATCATATTCTCTTATTTACTTTCAGTTTTCTCTCTGAGAATCGGACTGGAAAGTTCAGCTATGGCTATTCTAGTTTCAAGGGTAAAAGGGCTTCGATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTCGATGGGCAGATGGTCGCTTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACAAAAACAGCTATTATTGAGGTTTTTAGACAGACAGATGTCGATTATATTAATGAAGAGAAAGGGCAGCAGAAAGATGCCGGGTCAACTGCATCAACTGCTGTCCTGTTGGGGGATCGTCTCCTTGTTGCAAATGTTGGGGATTCCAGAGTAGTTGCGTCTAGAGCTGGTTCAGCTATTCCTCTCTCTATTGATCACAAACCTGATAGATCAGATGAACGGGAAAGGATTGAACAAGCTGGAGGTTTCGTTATTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCACGTGCCTTTGGAGATAAGCTACTCAAACCATTTGTTGTTGCTGATCCCGAAATTAAGGAAGAAGAAATCAACGGTGTAGATTTTATTATTATTGCGAGTGATGGACTTTGGAATGTCATATCAAATGAGGATGCTGTAGCATTAGTGCAACACAACCAAGATGCAGAAATGGCGTCAAGAAAACTAATCCAAGAAGCTTATGCACGAGGGAGTTCCGACAATATTACATGCGTCATTGTACGATTTGGTTTTTCATAA 882 41.27 MFSRDSNVLFSGGGISFGSSETCTSNHILLFTFSFLSENRTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTKTAIIEVFRQTDVDYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFVIWAGTWRVGGILAVSRAFGDKLLKPFVVADPEIKEEEINGVDFIIIASDGLWNVISNEDAVALVQHNQDAEMASRKLIQEAYARGSSDNITCVIVRFGFS 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 76016297 76020540 - Hsped.02g27500.1 Hepe02g2750 564251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2750 293 FunFam probable protein phosphatase 2C 59 37 292 - -
Hepe02g2750 293 ProSiteProfiles PPM-type phosphatase domain profile. 45 290 IPR001932 -
Hepe02g2750 293 Gene3D - 37 292 IPR036457 -
Hepe02g2750 293 SUPERFAMILY PP2C-like 38 291 IPR036457 -
Hepe02g2750 293 SMART PP2C_4 35 288 IPR001932 -
Hepe02g2750 293 PANTHER PROTEIN PHOSPHATASE 43 288 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g2750 293 Pfam Protein phosphatase 2C 46 283 IPR001932 -
Hepe02g2750 293 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169(InterPro)
Hepe02g2750 293 CDD PP2Cc 44 290 IPR001932 -
Hepe02g2750 293 SMART PP2C_SIG_2 57 290 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1939 Hepe-Chr1:84250824 Hepe02g2750 Hepe-Chr2:76016297 1.73e-120 dispersed
Hepe02g0124 Hepe-Chr2:1422576 Hepe02g2750 Hepe-Chr2:76016297 2.91e-56 dispersed
Hepe02g2750 Hepe-Chr2:76016297 Hepe07g0084 Hepe-Chr7:787530 1.88e-112 dispersed
Hepe02g2750 Hepe-Chr2:76016297 Hepe01g1396 Hepe-Chr1:79193775 3.04e-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2750 K17506 - csv:101220053 496.123