Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2754 ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCACAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTGCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGTAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATGGCAGTAGCCACCCTGGTGCGGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTTAATAATCCTTCATCATCATTTGGAGCATCAAATATGACAAATCCCATTTCATCCGTCCAAGGGCAGAATCCACAATTTTCTAATCTTTCTAGCAGCCAGATGTTATCAGATCAGCAGCAGTCACAACAACTTGAACCCCAGAACTTCCAACATAGTCAACAGTCGATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACAACAATTTCAAGCAATTCGAGGGTTGACGGGTGTTGGATCTGTAAAGTTGGAGTCTCAAGTGACGAGCAATGATCAACATGGACAGCAGCAACAGCAGCATTTGCAAACATTGAGAAATCTTGGTGCAGTGAAAATGGAATCACAACGACTTCAATCGCTGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCAGACCAGTCATTATTTCTGCAGCAGCAGCAGCAGCAGCATTCACATCAACAACAGCAACCACAACAGTTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATTAATCTAATGCACCAACAAAGGCTTTTGCAATTGCAACAACAACATCAGCAACAACAACATCAACAACAACAACATCAACAACAACATCTTTTAAAAAGTATGCCTCCTCAACGGCCACAATTGCAACAACATTACCAACAGCAGAACCTTCCGCTAAGATCTCCTGTAAAACCAGGATATGAACCTGGAATGTGTGCTCGGCGTCTGACTCATTACATGTATCAGCAGCAACACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAGTGGTGCGTTTCCATGTATGGAAATGGGCGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGCAACCGCAAGCCTGGGCGTGGCTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACCATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCCGGTCAGATCGTGCTGGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTCCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCCTGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGGGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCTACTCCTGAATTGCAAAATAATTGTAACATGTTTGTGGCTTCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTTTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGCTTACTAATCAAGCTCAAGTTTCTGATGAGCAACAGCAACAACAACAGCAACAACAGTCATCCATAGCCCAGCACTCAAATAACAACCAGAGTTCTGCCCAGGCTTCTGCAGTGCAGCTCGCAGCTAGCAATGGTGTGACCAGTGTAAATAATACCGTCAACCAACCTTCAACATCAAACTCAGCGAGCACCATTGTTGGGCTTCTTCACCAGAATTCTATGAACTCGAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATTCCATCTCCTGGTTCTTCCAGTACAATTCCGCCTACGCAAAAGAACCCTTCTACTTTCCAGCCACCAACTCCCTCATTGTCTAACAATCTTTCACAACCATCGCATACAGCTGCAAAGAATGCCAATCAGATGAGTGCTGCTAATTCTCCGGCAAATATCTCTATGCAACAACCCGCTTTATCTGGAGATGCTGATCCTAGTGATACACAGTCCTCCGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCAAATGAATGGCCCGACAAGTCTGGTTGGCGTTGGTTCGGTGGTCAATGATATGAAAAATGTGAATGGGGTTTTGCCTACAGCTCTCAACAATGGGAATTGCATAGGGGGAAACGGAACAACGAACGGTGGTTCAGGCATGGGCGGAGGTGGATATGGTCATGGATCAATGGGTAGTGGGCTTGGGCAGACTGCCATGGTTAACGGAATGAGGACTGCAATGGGAAATAACTCCGTTATGAACAGACGAATAGGAATGGCATCGCTCGCTCTAGAACAAAGCATGAATGGTCAAACGCAGGATTTGGGAAACCAGCTTCTAAGTGGACTAGGAGCTGTAAATGGCTTTAGTAATCTCCAATTCGACTGGAAGCCATCACCATGA 2739 44.58 MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNGSSHPGAEPDPLSGVGNGMSFNNPSSSFGASNMTNPISSVQGQNPQFSNLSSSQMLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQQQFQAIRGLTGVGSVKLESQVTSNDQHGQQQQQHLQTLRNLGAVKMESQRLQSLRGLAPVKMEPQQSDQSLFLQQQQQQHSHQQQQPQQFLHMSRQSSQAAAAQINLMHQQRLLQLQQQHQQQQHQQQQHQQQHLLKSMPPQRPQLQQHYQQQNLPLRSPVKPGYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGLTNQAQVSDEQQQQQQQQQSSIAQHSNNNQSSAQASAVQLAASNGVTSVNNTVNQPSTSNSASTIVGLLHQNSMNSRQQNSMANASNSYGGSSVQIPSPGSSSTIPPTQKNPSTFQPPTPSLSNNLSQPSHTAAKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNQMNGPTSLVGVGSVVNDMKNVNGVLPTALNNGNCIGGNGTTNGGSGMGGGGYGHGSMGSGLGQTAMVNGMRTAMGNNSVMNRRIGMASLALEQSMNGQTQDLGNQLLSGLGAVNGFSNLQFDWKPSP 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 76062920 76088430 - Hsped.02g27540.1 Hepe02g2754 564255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2754 912 MobiDBLite consensus disorder prediction 94 150 - -
Hepe02g2754 912 Coils Coil 279 299 - -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 589 644 - -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 596 644 - -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 282 324 - -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 282 329 - -
Hepe02g2754 912 PANTHER LIM DOMAIN-BINDING PROTEIN 1 903 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Hepe02g2754 912 MobiDBLite consensus disorder prediction 229 267 - -
Hepe02g2754 912 Pfam LIM-domain binding protein 339 593 IPR029005 -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 228 267 - -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 681 746 - -
Hepe02g2754 912 MobiDBLite consensus disorder prediction 69 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2754 Hepe-Chr2:76062920 Hepe06g1292 Hepe-Chr6:62946256 9.24e-103 dispersed
Hepe02g2754 Hepe-Chr2:76062920 Hepe07g0183 Hepe-Chr7:1620833 3.23e-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2754 - - - 0.0