Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2778 ATGATGATGATGATGATCCACTCGTCTTCTTCACCGATCTTCATTTTCTTGATCCTCTCCAATTTCGCCTCTCTTTCCCTTTCTTTCTCCCCCAATCAAAACGTTACCCTCTCCGGCGACGCCCATCTCAGAAACAACGCCATTCTTCTCACTCAAGAACTCAATTGCCTTCCCTTTTCTTCTTCCTCCACCTCTTCTTCCGGCGGCGTCGGAACCGCCTTCTACATAAACCCTATTCGCTTTCTTGATTCCTCCACCAATTCCACTGCTTCTTTCTCCTCCCGATTCTCCCTCTCCGTCGTTCCCACCCCTCTCTGCCCTTCCGCCGACGGAATCGCCTTCCTCATCACCTCCGATTCCAATTCTTTCAGTCGCTCTCATGGCTATATGGGCCTCCCCAAAGAACCCTCTCTAAATTCCCCCTTCTCCTTCATCGCCGTCGAATTCGACACCGATTTCAACCCTAATCTCGGCGACATTAACGATAATCATCTCGGCCTCGATGTCAACTCAGCTACTTCTTTGACCTCTGTGGATTTAGGGTCGAGAGGCATTGTTCTCAAAAATGGTAGACGGATTAATGCTTGGATTGAGTACAGGGATGATTCGAAGATGATTCAGGTCTGGGTTGGGTATTCGCAGACTCGACCGGAAAATCCTCTTTTGGTTGCGCCGATTGATCTCTCCAAGCAATTTAAGGAGTTTATGTATGTGGGTTTCTCTGCTTCTAATGGTCAGGGCTCTGCTCTTTACATTGTTGATAGATGGCGATTTAGAACTTTTGGGTTGGTTCCTTCTTTGAGTCCTGTTGATACCATTAATGAATGGGATTGTTTTATGTGCTCCTCGCCGGAGGATTCGAGCGCGAATAGCAGACATGTTTTCGGTGCTCGTAAAAGGAGGAAGAAAATTGATGAGATGACCCTTGGATTGGGGGGTTTGGCTGCAATTGTTTGCTCTATTATTGCAATTGTTGGTTTGGTTGGTTTTGTTTTGATGAAGAAGTTGAGAGGTAGAGGAAGTCAGAGAAGGTGTGAATTTGAGATGAACAGAGTTCCAATGAGATTGTCTCTTGGGGAGATAAAGATGGCTACAATGGGGTTTAATCAAAACAGAGTTGTTGGGGAAGGTGGTTCTGCAATTGTTTACAAAGGGTCTCTTGCATCAGGTGGAGAAGTGGCTGTTAAACGATTCGAGCGAGGCACTGTGAACGATCATCTGTGCAATCCTTTCGCCACGGAGTTTGCAACGATGGCGGGATGTTTACGACACAAGAATTTGGTTCAGCTTCATGGATGGTGCTGTGAGGCAAATGAGTTGGTGCTTGTTTATGAGTACTTGCAAAATGGAAGCCTTGCCAAACTTCTTCACAAGGGCTTCTCCAATTCACAATTTGTCCTTCCTTGGAAGAAGAGGTTTTCCATAGTTCTTGGGGTTGCTTCTGCATTGACATATCTTCATGAAGAGTGTGAGAGCCAAATTATCCATAGAGATGTCAAGACTTGCAACATTATGCTCGATGCCGAGTTCAATGCCAAACTCGGGGATTTCGGTTTGGCTGAAGTATATGAACACAGTTCGATCACAAGAGAAGCAACCATACCAGCGGGAACAATGGGATATCTTGCACCGGAATACGTTTATTCTGGTGTTCCCACCGTTAAAACAGATGTTTACAGCTTCGGTGTGGTGATGCTCGAAGTTGCCTCGGGAAGGAGGCCCGTAAATGAAGACGGTACGGTGCTTGTTGATTGGATTTGGGAGCTATGGGAAGTGGGGAAACTGATTGAAGCATCTGATACAAGGTTGATGGGAAAGTACAATATAGTAGAAATGGAGAGAATGCTAATGGTGGGACTTTTTTGTGTACATCCAAATCATGAAAAGAGGCCAACTGTGAAAGAAGCTGCAAGGATTCTTAAAGGGGAAGCACCACTCCCAGTACTGCCATCAAGGAAGCCAAGGGTCAGCATCCGGCCTATTTTTCCCGATGATGATTCCGAAGACATGGAAAGTCCTTGTGGCGATTATCTCGGCCTCGGCGAGTCGGCGTGGATGACCCCCAAGAGTCAATTTAGTTAG 2082 46.25 MMMMMIHSSSSPIFIFLILSNFASLSLSFSPNQNVTLSGDAHLRNNAILLTQELNCLPFSSSSTSSSGGVGTAFYINPIRFLDSSTNSTASFSSRFSLSVVPTPLCPSADGIAFLITSDSNSFSRSHGYMGLPKEPSLNSPFSFIAVEFDTDFNPNLGDINDNHLGLDVNSATSLTSVDLGSRGIVLKNGRRINAWIEYRDDSKMIQVWVGYSQTRPENPLLVAPIDLSKQFKEFMYVGFSASNGQGSALYIVDRWRFRTFGLVPSLSPVDTINEWDCFMCSSPEDSSANSRHVFGARKRRKKIDEMTLGLGGLAAIVCSIIAIVGLVGFVLMKKLRGRGSQRRCEFEMNRVPMRLSLGEIKMATMGFNQNRVVGEGGSAIVYKGSLASGGEVAVKRFERGTVNDHLCNPFATEFATMAGCLRHKNLVQLHGWCCEANELVLVYEYLQNGSLAKLLHKGFSNSQFVLPWKKRFSIVLGVASALTYLHEECESQIIHRDVKTCNIMLDAEFNAKLGDFGLAEVYEHSSITREATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVMLEVASGRRPVNEDGTVLVDWIWELWEVGKLIEASDTRLMGKYNIVEMERMLMVGLFCVHPNHEKRPTVKEAARILKGEAPLPVLPSRKPRVSIRPIFPDDDSEDMESPCGDYLGLGESAWMTPKSQFS 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 76376830 76379130 - Hsped.02g27780.1 Hepe02g2778 564279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2778 693 Gene3D Transferase(Phosphotransferase) domain 1 447 645 - -
Hepe02g2778 693 SMART serkin_6 368 639 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2778 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 268 IPR013320 -
Hepe02g2778 693 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246(InterPro)
Hepe02g2778 693 SUPERFAMILY Protein kinase-like (PK-like) 348 640 IPR011009 -
Hepe02g2778 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2778 693 Pfam Legume lectin domain 28 260 IPR001220 GO:0030246(InterPro)
Hepe02g2778 693 ProSiteProfiles Protein kinase domain profile. 368 649 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2778 693 Gene3D - 21 264 - -
Hepe02g2778 693 FunFam L-type lectin-domain containing receptor kinase VIII.1 447 658 - -
Hepe02g2778 693 Pfam Protein kinase domain 369 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2778 693 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Hepe02g2778 693 PANTHER - 37 650 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Hepe02g2778 693 FunFam L-type lectin-domain containing receptor kinase S.6 334 446 - -
Hepe02g2778 693 Gene3D Phosphorylase Kinase; domain 1 328 446 - -
Hepe02g2778 693 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524(InterPro)
Hepe02g2778 693 CDD STKc_IRAK 374 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2778 Hepe-Chr2:76376830 Hepe06g0588 Hepe-Chr6:43230643 1.42e-146 dispersed
Hepe02g2778 Hepe-Chr2:76376830 Hepe06g0141 Hepe-Chr6:5131041 3.92e-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72601 PF00069 Pkinase 1.50E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2778 - - - 0.0