Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2790 | ATGATGGATTTGAACTTCACCGCCAGGAAACCGCCGCATACGGCGGTGAGGATGGAAATGATAGAACAGATGCCGGAGGCACCACAGCGCGGCTACCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTAGCTAATTTCGACGATCTTCTCCTCTTCGACCCTCCCGACCTCGATTTATCATCTCCCCTTCCTTCTCCATCGCCGTCGCCCTCTCCGACGCCGGCGGGGGCTCATATGGCCGTCGATTCCCCTGAAGACGCTTCTGCCTCGAAACCTAGGGCTGGTAGCGGTAACGGTAACTCCGCTTCCTTCTTCGGCGCTCACTGCCGGAGCTTATCGATGGATTCCGACTTCTTCGACGGCTTGGGGATGGCCGGAGATGGCAGCGACGGTGAGGTACTTGGCGGGAAGATGAGTCGCCATAGGCATAGCAATTCCATGGATGGCTCTTTGACCTCCTCGTTTGAAGCTGATTCCACCGTCGGAATTGATTACTCTAAGAAGGCCATGGCGCCTGATAAACTCGCTGAACTTGCTTTGATGGATCCTAAAAGAGCTAAGAGGATTCTGGCGAATAGACAATCTGCTGCACGGTCCAAGGAGAGGAAAATCCGTTACACAAACGAATTAGAGAAGAAAGTGCAGATGCTTCAGTCAGAAGCGACTTCCCTTTCTGCACAAGTCACAGTGTTTCAGAGAGATACCACTGGATTGACTACTGAGAATAGAGAACTCAAGCTAAGGCTGCAAGCCATGGAGCAGCAAGCCCATCTAAGAGATGCTCTGAATGAGACACTGAGGGAGGAAGTGCAGCGGCTTAAGATAGCTGCTGCCCAACTGCCTGTTGCAAATGGCAACTCATTCAACTTTGGAGGGCTGCCCCCTCAATTCCCTCCTCTCCAGCCATCCTTGCTTCAATTTGGAAACTCCCAGAATCATCAACAGCAACAGCTGCTTCACATGTCTCAGCCTGATGCCCGAGGAGGAGAGTCTTCGCCGTCCCAGCTTCCCGGAGCTTAA | 1026 | 53.31 | MMDLNFTARKPPHTAVRMEMIEQMPEAPQRGYHHRRSHSDTSFRLANFDDLLLFDPPDLDLSSPLPSPSPSPSPTPAGAHMAVDSPEDASASKPRAGSGNGNSASFFGAHCRSLSMDSDFFDGLGMAGDGSDGEVLGGKMSRHRHSNSMDGSLTSSFEADSTVGIDYSKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVFQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNFGGLPPQFPPLQPSLLQFGNSQNHQQQQLLHMSQPDARGGESSPSQLPGA | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 76820424 | 76822658 | - | Hsped.02g27900.1 | Hepe02g2790 | 564291 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2790 | 341 | Gene3D | - | 185 | 238 | - | - | |
Hepe02g2790 | 341 | Pfam | bZIP transcription factor | 186 | 231 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g2790 | 341 | MobiDBLite | consensus disorder prediction | 59 | 100 | - | - | |
Hepe02g2790 | 341 | FunFam | Transcription factor VIP1 | 185 | 238 | - | - | |
Hepe02g2790 | 341 | SUPERFAMILY | Leucine zipper domain | 186 | 237 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g2790 | 341 | MobiDBLite | consensus disorder prediction | 135 | 155 | - | - | |
Hepe02g2790 | 341 | Coils | Coil | 261 | 281 | - | - | |
Hepe02g2790 | 341 | CDD | bZIP_plant_RF2 | 187 | 236 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g2790 | 341 | MobiDBLite | consensus disorder prediction | 295 | 341 | - | - | |
Hepe02g2790 | 341 | Coils | Coil | 209 | 229 | - | - | |
Hepe02g2790 | 341 | Coils | Coil | 237 | 257 | - | - | |
Hepe02g2790 | 341 | SMART | brlzneu | 182 | 246 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g2790 | 341 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 21 | 322 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe02g2790 | 341 | MobiDBLite | consensus disorder prediction | 61 | 75 | - | - | |
Hepe02g2790 | 341 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 184 | 247 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g2790 | 341 | MobiDBLite | consensus disorder prediction | 304 | 341 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2790 | Hepe-Chr2:76820424 | Hepe10g1972 | Hepe-Chr10:56752364 | 2.18e-88 | dispersed | |
Hepe02g2790 | Hepe-Chr2:76820424 | Hepe10g1387 | Hepe-Chr10:50227677 | 1.11e-49 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55131 | PF00170 | bZIP_1 | 7.20E-07 | CL0018 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2790 | K20557 | - | csv:101215277 | 395.201 |