Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2842 ATGGAGAAATCCCCTGTTTATTCCCTCCATTCCCTGTTGATCTTTCTCTCCATTTTGAGTCTCTTTGTTCCAAGTCTGCCTCTTCCGACCGAGACTCGAGCATTGCTTCGTTTCAAAGAGAATCTCAAAGACCCGACGGGTTTTCTTCATTCTTGGATTGATTCTGAATCCCCTTGTGGATTCTCTGGAGTTACTTGCGATCGGGTTTCCGGGAAAGTCGTGGAGATTTCCTTGGAAAACAAGTCGCTTTCTGGAGAGATTTCTCCTTCAATTTCTGTTCTGCAAAGTCTCACAACACTTTCATTGGCCTCAAACCACATTTCTGGGGGGCTTCCCTACCAACTGATCAACTGTAGCAATCTTAGAGTATTGAATCTCACTGACAATGAAATGGTTGGGAGAATTCCTGATCTTTCTCAGCTGAGAAAATTGGAGATTCTAGATCTATCCATCAACTTCTTTTCTGGCCAATTCCCAATCTGGGTCGGAAATTTAACTGGATTGGTTTCTCTGGGACTCGGTGAAAATGAGTTCGAGGCTGGTGAAATACCAGAATCTATTGGAAATTTGAAGAACTTAACTTGGCTATATCTAGCAAATGCACATTTGAGAGGGGAAATACCAGAGTCTCTCTTTGAATTGAAGGCATTAGAGACATTGGATCTTTCAAGGAACAAGATTTCCGGTAAACTCTCGAAGTCGATATCCAAGTTGCAGAATCTGAATAAGCTTGAGCTTTTTGTCAACAACTTGACTGGAGAAATCCCACCAGAGATTTCAAATCTTACCCTTCTGCAAGAAATTGATATTTCTAAAAATAGTTTGTATGGAGAGTTGCCTGAAGAGATTGGGAACCTGAGGAATTTGGTGGTTTTTCAGTCGTATGAAAACAACTTCTCTGGAAAGCTTCCTGAAGGATTTGGAAATATGCAAAATCTTACAGCATTTTCAATCTATAGGAACAACTTTTCCGGGGAATTTCCGGTGAACTTTGGCAGATTCGCTTCGCTCAACAGCATCGACATATCTGAGAACCAATTTTCGGGGAACTTCCCCAAGTTCTTGTGTGAGAATAGGAAGTTGCAGTTCTTACTTGCTCTGGAAAATAGATTTTCAGGTGAGCTGCCACTTTCTTTAGCTGAGTGCAAATCACTGCAAAGATTCAGAATCAATAATAATCAAATGTCAGGCAGAATTCCAGATGGGTTATGGGCTCTTCCGTATGCAAAAATGATTGATTTTAGTGACAATAAATTCACTGGAGTTATATCCCCAAACATTGGTTTATCTACATTCTTGAACCAATTGATTTTGCTAAACAATAAGTTTTCATGTAAGCTTCCATCAGAGCTTGGCAAGTTGACAAATTTAGAGAGGCTTCACTTGAGTAATAATGACTTCAATGGAGAAATACCTTCTGAAATTGGTTTTCTCAAACAACTTTCATCATTACATCTGGAAGTAAATTCTTTGAATGGATCAATCCCACTAGAGATTGAAAATTGTGAAAGACTTGTGGACATAAATTTTGCTCACAACTCTCTTAGTGGTGGCATTCCATCTTCATTTTCATTAATCAGCTCTTTGAACTCACTGAATCTCTCGAGCAACAAATTTACAGGTATAATCCCAGAATACTTGGAGAAAATGAAACTGAGTTCGATAGATTTGTCGGGAAATCAGCTGTTCGGAAGAGTTCCATCCAGTCTTCTGGCAATGAGTGGAGACAAAGCATTTTTGGACAACAAAGAACTTTGTGTTGATGAAAACTACAGAGAAAGGATAAATACCAGCCTGATTACTTGTACTCGAAAGCATAGTCAGAAAGGGGTGCTTGATGATAAACTTGTATTTTTCAGTATCATAGTCTCCGTCTTGGTTTGTGTATTAGCAGGGCTAGTGTTGGTAAGTTGTAACTACTTGAAGCGCAGCGGGACTGGCTTTGAGACCAGTCGGGAAGGGGGCCAACAAGGATCTCCAAAATGGAAAATTGCATCATTCCATCAAGTGGAAATTGATGCAGATGAAATTTGCAGATTTGACGAAGACAACTTGGTAGGGAGTGGAGGAACGGGAAAAGTTTATCGGTTGGATCTGAAGAAGAACGGCGGTACAGTGGCTGTTAAGCAGCTCTGGAAAGGAGATGCAATGAAGGTTTTGGCAGCAGAAATGGAGATTCTGGGAAAGATAAGGCATAGAAACATCTTGAAGCTCTATGCCTGCTTAATGAAAGAAGGATCTAGTTATCTAGTTTTGGAATATATGACTAATGGCAACCTGTGTGAAGCACTTCAGAGACAGATCAAAGGTGGACAGCCTGAATTGAACTGGTATCAGAGGTACAGGATTGCCTTGGGAGCAGCAAGGGGAATTGCTTACTTGCACCATGATTGTTCACCACCTATAATTCATAGAGATATAAAGTCAACAAACATACTTCTTGATGGAGATTTTGAACCAAAAATTGCTGATTTTGGGGTTGCAAAAGTTGCAGATCAGTCTCAAAATGTTTCTGAGAACAGCTCTTTTGCTGGCACTCATGGTTATATTGCTCCTGAGCTAGCATATACTCCGAAAGTTTCAGAAAAGAGTGATGTGTACAGTTATGGTGTGGTGCTATTAGAATTGATTACTAGTAGGAGACCAATCGAAGATGAATATGGAGAAGGAAAAGATATAGTTTATTGGGTCTCAACACACCTCGATGACCGTGAGAATGTCCTCAAGCTTCTCGACATCAAAGTTGCATCTGAAGTCATCCAAAATGACATGATCAAAGTGCTGAAGATTGCTGTACTTTGCACAACAAAGCTTCCATCACTTCGCCCTTCAATGAGAGAGGTAGTGAAGATGCTAGTAGACGCTGATTCCTACTCTTCTTCAATGCCCCTGAACAACAGTTCAAACAAAAACATTAAGGATTTTGTTTAG 2931 40.19 MEKSPVYSLHSLLIFLSILSLFVPSLPLPTETRALLRFKENLKDPTGFLHSWIDSESPCGFSGVTCDRVSGKVVEISLENKSLSGEISPSISVLQSLTTLSLASNHISGGLPYQLINCSNLRVLNLTDNEMVGRIPDLSQLRKLEILDLSINFFSGQFPIWVGNLTGLVSLGLGENEFEAGEIPESIGNLKNLTWLYLANAHLRGEIPESLFELKALETLDLSRNKISGKLSKSISKLQNLNKLELFVNNLTGEIPPEISNLTLLQEIDISKNSLYGELPEEIGNLRNLVVFQSYENNFSGKLPEGFGNMQNLTAFSIYRNNFSGEFPVNFGRFASLNSIDISENQFSGNFPKFLCENRKLQFLLALENRFSGELPLSLAECKSLQRFRINNNQMSGRIPDGLWALPYAKMIDFSDNKFTGVISPNIGLSTFLNQLILLNNKFSCKLPSELGKLTNLERLHLSNNDFNGEIPSEIGFLKQLSSLHLEVNSLNGSIPLEIENCERLVDINFAHNSLSGGIPSSFSLISSLNSLNLSSNKFTGIIPEYLEKMKLSSIDLSGNQLFGRVPSSLLAMSGDKAFLDNKELCVDENYRERINTSLITCTRKHSQKGVLDDKLVFFSIIVSVLVCVLAGLVLVSCNYLKRSGTGFETSREGGQQGSPKWKIASFHQVEIDADEICRFDEDNLVGSGGTGKVYRLDLKKNGGTVAVKQLWKGDAMKVLAAEMEILGKIRHRNILKLYACLMKEGSSYLVLEYMTNGNLCEALQRQIKGGQPELNWYQRYRIALGAARGIAYLHHDCSPPIIHRDIKSTNILLDGDFEPKIADFGVAKVADQSQNVSENSSFAGTHGYIAPELAYTPKVSEKSDVYSYGVVLLELITSRRPIEDEYGEGKDIVYWVSTHLDDRENVLKLLDIKVASEVIQNDMIKVLKIAVLCTTKLPSLRPSMREVVKMLVDADSYSSSMPLNNSSNKNIKDFV 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 77496150 77501678 + Hsped.02g28420.1 Hepe02g2842 564343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2842 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2842 976 Gene3D Phosphorylase Kinase; domain 1 664 754 - -
Hepe02g2842 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 755 970 - -
Hepe02g2842 976 Gene3D Ribonuclease Inhibitor 181 273 IPR032675 -
Hepe02g2842 976 Gene3D Ribonuclease Inhibitor 28 180 IPR032675 -
Hepe02g2842 976 FunFam Leucine-rich receptor-like protein kinase family protein 670 754 - -
Hepe02g2842 976 SUPERFAMILY Protein kinase-like (PK-like) 677 952 IPR011009 -
Hepe02g2842 976 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524(InterPro)
Hepe02g2842 976 Gene3D Ribonuclease Inhibitor 472 593 IPR032675 -
Hepe02g2842 976 Gene3D Ribonuclease Inhibitor 373 471 IPR032675 -
Hepe02g2842 976 ProSiteProfiles Protein kinase domain profile. 680 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2842 976 Gene3D Ribonuclease Inhibitor 274 372 IPR032675 -
Hepe02g2842 976 SMART serkin_6 680 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2842 976 SMART LRR_typ_2 94 118 IPR003591 -
Hepe02g2842 976 SMART LRR_typ_2 526 549 IPR003591 -
Hepe02g2842 976 SMART LRR_typ_2 454 478 IPR003591 -
Hepe02g2842 976 SMART LRR_typ_2 262 286 IPR003591 -
Hepe02g2842 976 SMART LRR_typ_2 190 214 IPR003591 -
Hepe02g2842 976 FunFam Probable inactive receptor kinase RLK902 28 185 - -
Hepe02g2842 976 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 SUPERFAMILY L domain-like 182 420 - -
Hepe02g2842 976 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 210 306 - -
Hepe02g2842 976 FunFam LRR receptor-like serine/threonine-protein kinase EFR 307 607 - -
Hepe02g2842 976 Pfam Protein kinase domain 682 950 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2842 976 Gene3D Transferase(Phosphotransferase) domain 1 755 973 - -
Hepe02g2842 976 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 954 IPR050647 -
Hepe02g2842 976 Pfam Leucine Rich Repeat 265 286 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 Pfam Leucine Rich Repeat 96 118 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 Pfam Leucine Rich Repeat 528 550 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 Pfam Leucine Rich Repeat 240 262 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 Pfam Leucine Rich Repeat 456 478 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 Pfam Leucine Rich Repeat 217 238 IPR001611 GO:0005515(InterPro)
Hepe02g2842 976 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Hepe02g2842 976 SUPERFAMILY L domain-like 408 571 - -
Hepe02g2842 976 SUPERFAMILY L domain-like 56 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1596 Hepe-Chr2:21194246 Hepe02g2842 Hepe-Chr2:77496150 1.77e-17 dispersed
Hepe02g2842 Hepe-Chr2:77496150 Hepe04g1879 Hepe-Chr4:73725561 1.80e-75 dispersed
Hepe03g1173 Hepe-Chr3:65344781 Hepe02g2842 Hepe-Chr2:77496150 1.92e-40 dispersed
Hepe02g2842 Hepe-Chr2:77496150 Hepe06g0078 Hepe-Chr6:2512610 1.02e-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72606 PF00069 Pkinase 4.00E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2842 - - - 0.0