Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2847 ATGATGAACACCATGGGAATGTTTGATGATATTGGCTTTTGCCGAAATCTTGAATATTTTTCGGCTCCTCCTGGGGAACAAGAGATAGCTCGGGAGAATGAAGCTGACGCTACTTTGGAGGAAGATTATACTGATGAAGAGCTGGACGTTGACGAGCTTGAGAGAAGGATGTGGCGGGACCGAATGCTTTTGAGGCGACTCAAAGAACAAGGCAAAGAGAAGGAAGAAGGGGTTGATAATTCAAAGCAGCGTCAATCCCAGGAGCAGGCCCGCAGGAAGAAGATGTCTCGGGCTCAAGACGGTATTCTGAAATATATGTTGAAAATGATGGAGGTTTGTAAAGCTCAAGGTTTCGTTTATGGGATCATTCCTGAGAAAGGAAAACCAGTAAGTGGAGCTTCTGATAATCTCCGTGCCTGGTGGAAAGAAAAAGTCAGATTCGATAGAAATGGCCCTGCAGCGATTTCCAAATATCAGGCTGACCATGCGATTCCTGGGAACGATGATGACTGCAATACAGTGACATCCACTCCTCACACCTTACAAGAGCTCCAAGACACGACCCTCGGATCACTTTTGTCGGCCCTGATGCAGCACTGCGATCCACCCCAGAGGCGATTTCCATTGGAGAAGGGAGTTTCACCACCGTGGTGGCCCACCGGAAATGAGGAATGGTGGCCTGAATTGGGACTGCCCAAGGACCAGGGGCCTCCCCCTTATAAGAAGCCCCATGATCTGAAGAAGGCTTGGAAAGTCAGCGTTCTCACTGCTGTGATTAAGCACATGTCTCCTGATATCGCCAAGATTCGCAAGCTTGTTCGGCAGTCTAAATGTTTGCAAGACAAGATGACTGCAAAGGAGAGTGCTACATGGCTGGCCATTGTAAACCAGGAAGAAGCCTCGGCCAGGAAATTGTATCCTGATAAATGCCCGCCTGTGTCGATTTGTGGGAGTGGATCTCTTCTAATCAGTGACACCAGCGATTACGACGTCGAAGGAGTAGAAGATGAAGCAAATGTCGATCTAGAGGAAAGCAAACCCCACGATCTCAATTTCTTTAATATGGGGGCTCCTGGACCTAGAGAGAGGCTTATGATGCCGCCAATTGGACCCCATATCAAGGAAGAACTCTTGGAGAACAATTCAGACTTCATTCAAAAGAGGAAGCAGCTGACAGATGAGTCGAATACAATGATGAATCAGAAGATTTATACTTGCGAGTATCCTCAATGCCCTTATAATAGTCAGCGCCTCGGGTTTCTCGACAGGACTTCAAGAAACAACCACCAGTTAAATTGCCCATTTAGGAGTGATTCTTCTTCCCATATATTTAGCATGCCAAGCTTTCAAACTAACGATGACAAATCATCCCCAGTTCCTCCATCCTTCAACCATTCTAAGCCTCCTACTCGGCCGATGAACCCGACTCCACCCTTCAGAGTATCAGGACTTGGACTTCCAGAAGATGGACAGAAAATGATTTCCGACCTTCTGAGTTTCTACGATTCTAACCATCAACAGGACAAAAGTTTGAATTCCGTGAACGTCGAAGCTAGAGACAATCACAATCACAATCACAACCAACAGCTGCCGAAATTCCAACTCCAAGTCGACGATAACTTGTATTGCCAAGGAGCAATTGTTGGAAACAGTAGCATGCCAATGCAGCACCCTGATTTTTCTTCCACAAAAGTTCCATTTGACGAATACAAGGCATTCGATTCTCCATTCGGCATGTATTCCAACGACAACATTCCAGACTTCAGATTTGGTTCTCCATTCAACTTGGCATCAATTGATTATCCAGTAGATCCACAATTGCCGAAGCAAGATACACCGTTATGGTACCTTTGA 1854 46.12 MMNTMGMFDDIGFCRNLEYFSAPPGEQEIARENEADATLEEDYTDEELDVDELERRMWRDRMLLRRLKEQGKEKEEGVDNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAISKYQADHAIPGNDDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEASARKLYPDKCPPVSICGSGSLLISDTSDYDVEGVEDEANVDLEESKPHDLNFFNMGAPGPRERLMMPPIGPHIKEELLENNSDFIQKRKQLTDESNTMMNQKIYTCEYPQCPYNSQRLGFLDRTSRNNHQLNCPFRSDSSSHIFSMPSFQTNDDKSSPVPPSFNHSKPPTRPMNPTPPFRVSGLGLPEDGQKMISDLLSFYDSNHQQDKSLNSVNVEARDNHNHNHNQQLPKFQLQVDDNLYCQGAIVGNSSMPMQHPDFSSTKVPFDEYKAFDSPFGMYSNDNIPDFRFGSPFNLASIDYPVDPQLPKQDTPLWYL 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 77535414 77538869 - Hsped.02g28470.1 Hepe02g2847 564348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2847 617 MobiDBLite consensus disorder prediction 446 461 - -
Hepe02g2847 617 Coils Coil 36 84 - -
Hepe02g2847 617 MobiDBLite consensus disorder prediction 446 476 - -
Hepe02g2847 617 FunFam Ethylene insensitive 3-like 1 172 309 - -
Hepe02g2847 617 SUPERFAMILY DNA-binding domain of EIN3-like 178 301 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe02g2847 617 MobiDBLite consensus disorder prediction 69 95 - -
Hepe02g2847 617 FunFam Ethylene insensitive 3-like 1 84 162 - -
Hepe02g2847 617 Coils Coil 374 394 - -
Hepe02g2847 617 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 7 612 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Hepe02g2847 617 Gene3D - 84 164 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe02g2847 617 MobiDBLite consensus disorder prediction 462 476 - -
Hepe02g2847 617 Gene3D - 176 309 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe02g2847 617 Pfam Ethylene insensitive 3, DNA-binding domain 51 299 IPR047091 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2847 Hepe-Chr2:77535414 Hepe09g1037 Hepe-Chr9:10749433 4.87e-239 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55138 PF04873 EIN3 2.40E-132 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2847 K14514 - csv:101214396 1072.77