Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2857 ATGGCGTCAGAGCGGCCGCTATTGATTATATCTCCAAGAACACCCAAAACTATCTCTCACGATCTACAGAAACCGGAGCCGAACCGACCTGGATTGTTCTTCGCCATGGATTCTCGAAGCCCTTATGAGAACTCGGCGAGTACCGAACTGGATCATCGCTCTTTCTCGCGGCGAAGTCAATCGTCGTTACAATCGAAATCTTCAATTCGTGAAGTGGGTTCCAGTGATTTTGGATCGAGGCCTGTTCGTCATGGCTCTCGAGGAGCTGATTCTGAAGTATTGAGCATATCCCAGAAGGAGATCAGTGATGAAGATGCGAGGTTGATTTACATCGATGATGCTGAAAAGACGAACGAGAAGTTTGAATTCGCTAGAAATTCGATTCGCACCGCCAAGTATTCGATTCTAACTTTTCTACCGAGGAATCTGTTTGAACAGTTTCATAGAATTGCTTATGTATATTTCCTTGTTATTGCGGTTCTTAATCAACTTCCCCAGCTTGCCGTTTTTGGTCGGACAGTCTCCATTTTGCCTTTAGCCTTTGTGCTGCTAGTTACTGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAATAATAGATTAGCTTCAGTTTTGGTTGATGGTCAGTTTCAAGAGAAGAAATGGAAGGATATTAGAGTTGGTGAGATAATTAGGATTGGTGCAAATGGCCCCATTCCTTGTGATATAGTGCTTCTCTCTACCAGTGATTCCACAGGGGTTGCGTATGTGCAGACTCTGAATTTGGATGGGGAATCGAATTTGAAAACCAGGTATGCGAAACAAGAGACGATGTCTAAAATGCCTGACAAGGAGAAGATTGTTGGGTTGATTAAGTGTGAGAAACCCAATAGGAATATCTATGGATTTTATGCTAATATGGAGATTGATGGGAAACGTCTTTCTCTTGGACCTCCAAACATAGTTCTTCGTGGTTGTGAGCTCAAGAATACGAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAGACCAAAGTCATGCTTAACAGTTCTGGAGCTCCATCGAAAAGAAGCCGACTCGAGACTCGAATGAATGTGGAGATTGTTATGCTTTCTTTCTTTCTCATTGCTTTGTGTACTGTTGTTTGTGTTTTGGCTGCTGTTTGGTTCATCAGAAATAAGGAAGATTTGGACATTTTACCTTATTTCAGAAATAAGGATTTCTCAAAAGACCCACCTGAAACCTATAATTACTATGGATGGGGATTGGAGGCGTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATCATGATCCCCATTTCACTTTACATTTCGATGGAGCTTGTTCGCGTCGGCCAAGCTTATTTCATGATCAGAGACACCCAAATGTATGATGAAGCATCAAATTCAAGATTTCAATGCCGGGCTTTGAACATAAATGAGGATTTAGGACAAATTAAGTATGTGTTTTCAGACAAAACGGGTACCCTTACCGAGAATAAGATGGAATTTCGATGCGCAAGCATCTGGGGGGTCGACTATGGAGGTGAAAGTACCAATGCCCCTGACGAGCAGATTGGATACTCTGTTCGAGTGAACGGAATGGTTTTGAGACCGAAATTGGCTGTCAAAACTGATCCTGTGCTTCTACAATTATTAAAAAGTGGAAAGCACACCAAGGATGGAAGATATATTCATGATTTCTTCCTCGCATTAGCCGCTTGCAATACCATCGTTCCTCTCATTACGGGAACTTCTGATCCTTCTGTGCAATTAATCGACTACCAAGGGGAGTCTCCAGATGAACAAGCATTGGTTTATGCTGCTGCGGCATACGGTTTTATGCTAATCGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAGACAAAGGTATAATGTTCTGGGAATGCACGAGTTTGATAGCGACAGGAAGCGGATGTCGGTCATATTGGGGTGTCCTGATATGACCTTTAAAGTATTTGTAAAAGGTGCCGATAGCTCTATGTTCAAGGTGATGGGTGAAACTCTGAACGTGGATATCATTCAAATGACTAAGGCTCATCTTCATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGAATGAAAGAACTCAGTTCTTCCGACTTTGATACATGGCACTTGATGTTTGAGGAAGCAAGCACCGCTTTGATTGGCAGGGCCGCTAAGCTTCGCAAGGTTGCCAGTAGCATAGAAAAAAAATTGTCCATATTGGGTGCCTCAGGCATTGAAGATAAGCTACAAAAAGGCGTGCCAGAAGCTATAGAAGCTTTAAGAATGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGCCATATCAATAGGTTACTCTTCAAAGCTCTTGACAAACAAGATGACCCAAATTATAATTAACAGCAACTCAGCCGAATTATGCAAAAGGAGTTTAGAAGATGCAATAATCATGTCGAAGAAGCTTGCTACTGCCTCAGGGGTTACACTGGATAGCGAAGGAAGCACCGAAGTTGTAACGACTTCGATTGCGTTGATCATTGATGGTAGCAGCCTAGTTCATATTCTCGACACTAAACTCGAAGAACAGCTTTTCCAACTATCTGGTAACTGTTCGGTGGTGTTATGCTGTCGAGTTGCCCCATTGCAGAAAGCTGGAATTGTTGCTCTTGTCAAGAGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCGAATGATGTGTCAATGATCCAAAAGGCAGACGTGGGTGTTGGTATCAGTGGTCTCGAGGGTCGACAAGCTGTCATGGCATCGGATTTTGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGAATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCAGTATTTGTGCTTGTTTTATTTTGGTATGTGCTCTTTACCGGTTACTCGATGACGACGGCGATCAACCAATGGAGTAGTGTACTCTACTCTATAATCTATACTTGTTTGCCCACAATTGTTGTTGGAGTTCTTGACAAGGACTTGGGAAGAAGGACCCTTCTTAGTTATCCTCAACTTTATGGGGCTGGCCATAGACAGGAGAGCTACAACTCTGGGTTGTTTTGGTTAACAATGATCGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCTTTTCATTCTGGGCTACCACCGTCGACGTTTCGGGCCTTGGAGATCTCTGGCTACTCGCCACGGTCATCGTAGTCAACTTGCACTTGGCAATGGATGTGGTTCGATGGTATTCCCTCACCCATGCTGTGATCTGGGGATCCACTCTTGCAACGTTCATTTGTGTCGTTGTTCTCGATTCAATACCATCGCTTCCAGGTTACTGGGCGATATATAACGTGGCGGGCACGGCATCTTTTTGGCTATGTTTGTTATCGATCATCGTAGTAGCGTTACTTCCTCGTCTTGTCGTAAAATACATTTATCAATATTACAGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAATTTGGAAGGACAAGAGAGCTGGGAGTTGTACAGACAGAGATGATCCCAGTCCTCAACAATCATTCACAAGTATGA 3645 43.18 MASERPLLIISPRTPKTISHDLQKPEPNRPGLFFAMDSRSPYENSASTELDHRSFSRRSQSSLQSKSSIREVGSSDFGSRPVRHGSRGADSEVLSISQKEISDEDARLIYIDDAEKTNEKFEFARNSIRTAKYSILTFLPRNLFEQFHRIAYVYFLVIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVDGQFQEKKWKDIRVGEIIRIGANGPIPCDIVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFYANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKVMLNSSGAPSKRSRLETRMNVEIVMLSFFLIALCTVVCVLAAVWFIRNKEDLDILPYFRNKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDTQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESTNAPDEQIGYSVRVNGMVLRPKLAVKTDPVLLQLLKSGKHTKDGRYIHDFFLALAACNTIVPLITGTSDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRYNVLGMHEFDSDRKRMSVILGCPDMTFKVFVKGADSSMFKVMGETLNVDIIQMTKAHLHSYSSKGLRTLVIGMKELSSSDFDTWHLMFEEASTALIGRAAKLRKVASSIEKKLSILGASGIEDKLQKGVPEAIEALRMAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSAELCKRSLEDAIIMSKKLATASGVTLDSEGSTEVVTTSIALIIDGSSLVHILDTKLEEQLFQLSGNCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSMTTAINQWSSVLYSIIYTCLPTIVVGVLDKDLGRRTLLSYPQLYGAGHRQESYNSGLFWLTMIDTVWQSIAIFFIPLFSFWATTVDVSGLGDLWLLATVIVVNLHLAMDVVRWYSLTHAVIWGSTLATFICVVVLDSIPSLPGYWAIYNVAGTASFWLCLLSIIVVALLPRLVVKYIYQYYSPCDIQIAREADKFGRTRELGVVQTEMIPVLNNHSQV 1214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 77650121 77655659 + Hsped.02g28570.1 Hepe02g2857 564358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2857 1214 FunFam Phospholipid-transporting ATPase 181 350 - -
Hepe02g2857 1214 SUPERFAMILY Calcium ATPase, transduction domain A 206 348 IPR008250 -
Hepe02g2857 1214 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 764 IPR023299 GO:0000166(InterPro)
Hepe02g2857 1214 Gene3D - 178 350 - -
Hepe02g2857 1214 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Hepe02g2857 1214 PRINTS P-type cation-transporting ATPase superfamily signature 912 931 - -
Hepe02g2857 1214 NCBIfam phospholipid-translocating P-type ATPase 123 1187 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Hepe02g2857 1214 SFLD p-type atpase 477 963 IPR044492 -
Hepe02g2857 1214 FunFam Phospholipid-transporting ATPase 752 952 - -
Hepe02g2857 1214 SUPERFAMILY HAD-like 480 953 IPR036412 -
Hepe02g2857 1214 ProSitePatterns E1-E2 ATPases phosphorylation site. 495 501 IPR018303 -
Hepe02g2857 1214 Pfam Phospholipid-translocating ATPase N-terminal 109 176 IPR032631 -
Hepe02g2857 1214 MobiDBLite consensus disorder prediction 1 91 - -
Hepe02g2857 1214 FunFam Phospholipid-transporting ATPase 597 730 - -
Hepe02g2857 1214 Pfam Phospholipid-translocating P-type ATPase C-terminal 940 1179 IPR032630 -
Hepe02g2857 1214 Pfam Cation transport ATPase (P-type) 601 677 - -
Hepe02g2857 1214 Gene3D - 597 730 IPR023299 GO:0000166(InterPro)
Hepe02g2857 1214 MobiDBLite consensus disorder prediction 57 74 - -
Hepe02g2857 1214 CDD P-type_ATPase_APLT_Dnf-like 125 1072 - -
Hepe02g2857 1214 Gene3D - 750 952 IPR023214 -
Hepe02g2857 1214 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1178 IPR023298 -
Hepe02g2857 1214 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 97 1179 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Hepe02g2857 1214 NCBIfam HAD-IC family P-type ATPase 883 999 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2857 1214 SFLD Haloacid Dehalogenase 477 963 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2857 Hepe-Chr2:77650121 Hepe04g0680 Hepe-Chr4:60310987 0.0 dispersed
Hepe02g2857 Hepe-Chr2:77650121 Hepe02g2152 Hepe-Chr2:58261726 3.81e-195 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2857 K14802 - csv:101212953 2192.16