Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2965 ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCTTCCAAGTCTAAATTCGCCGCCGCTGTCCCGATTTCCGGCGTCGCCGTCAATGCATCCTCGCGATTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCATACCTCGACGGATCAGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAATCTTGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCCGGGATTTTGGTACCCGAGGCGCTGGGTTTCGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCTGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCTACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAACACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCCGGAGGTGCTTTCGACCCATTGGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATAAAAAATGGTCGGTTGGCGTTGTTGGCATTTGTTGGATTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTGTCATTCCCCCTACAATTTCGCCTTGA 741 53.71 MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGFGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPPTISP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 78927245 78929273 - Hsped.02g29650.1 Hepe02g2965 564466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2965 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 235 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Hepe02g2965 246 FunFam Chlorophyll a-b binding protein, chloroplastic 51 237 - -
Hepe02g2965 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Hepe02g2965 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
Hepe02g2965 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2965 Hepe-Chr2:78927245 Hepe07g2501 Hepe-Chr7:69346219 9.55e-45 dispersed
Hepe02g2965 Hepe-Chr2:78927245 Hepe09g0112 Hepe-Chr9:895168 3.84e-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2965 K08907 - csv:101211428 496.893