Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2982 ATGGGGAAGAAGGGGGGCTGGTTTTCAGCTGTGAAGAAAGCATTTGCTTCTGAATCTAAGGAAAAGAAAGACCAGAAAACCAACACATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGAATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAGAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCCGCCGAGGCAGCCGTGGCAGCGGCTCAGGCTGCGGCGGAGGTCGTTCGGCTCACCATCATCCCTCGGTACTCCGGAAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCAAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTGAAGTCATTGATTCAAGGCCAATCTGTTAAAAGACAAGCAACCACCACATTAAGATGCATGCAGACTCTTGCTCGTGTCCAATCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAAGCTCTTCAGAGGCAGCTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTAGTTTTGCAAACAATGAATGGGATGATAGTACCAAATCAAAGGAGCAAACTGAAGCCAGATTAGTTAACAGACAAGAAGCAGCAACAAGAAGAGAAAGGGCGTTAGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCATTGGGGCTGGAGTTGGTTAGAACGATGGATGGCTGCTCGTCCATGGGAGTCTAAGAGCACTGTCGATTATCACGATCGTGGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGATATTTCCAAAACTTACTCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCGACGAGCCAAAAAACGAGCCGACCTCCGAGTCGCCAATCGCCGGCGACACCTACGAAGGCGCAATCGTCGCTATCTGCAGGGAGAAAATTGAAGTCGGCGAGTCCGAGAGGATTCGGCTGGGGAGGAGACGACGATTCCAGAAGCGGATTGAGCGTGAAATCGGAGCGGTACCGGCGACATAGCATCGCCGGATCATCGGTGAGGGACGACGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCTAGGGCTAGGTCTCGATTGTCGAGTCCAATGGGAACGGAGAAGGCGGCGGCGGAAACTCCGGAGAAGGGACCGGCGATTGGCGGCGTAAAGAAGCGGCTCTCGTTCGCCGCCTCGCCGGCTACGGCCACGGCGACTGCGAGGAGACACTCTGGTCCGCCGAAAATAGACGCTAGCCCGATCAAGAATGTTGCTGAGAGAGATTTTACCGGCGAGAGCAGATAG 1461 51.54 MGKKGGWFSAVKKAFASESKEKKDQKTNTSKKRWFGKPKKLETVASAENVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTIIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTSFANNEWDDSTKSKEQTEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPHWGWSWLERWMAARPWESKSTVDYHDRGSVKSAISHATSIGDISKTYSRRDLNLDIKPFPRTPTSQKTSRPPSRQSPATPTKAQSSLSAGRKLKSASPRGFGWGGDDDSRSGLSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKAAAETPEKGPAIGGVKKRLSFAASPATATATARRHSGPPKIDASPIKNVAERDFTGESR 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79044009 79048954 + Hsped.02g29820.1 Hepe02g2982 564483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2982 486 ProSiteProfiles IQ motif profile. 110 138 - -
Hepe02g2982 486 MobiDBLite consensus disorder prediction 320 353 - -
Hepe02g2982 486 MobiDBLite consensus disorder prediction 391 407 - -
Hepe02g2982 486 Coils Coil 173 193 - -
Hepe02g2982 486 MobiDBLite consensus disorder prediction 15 34 - -
Hepe02g2982 486 PANTHER IQ-DOMAIN 5-RELATED 4 433 - -
Hepe02g2982 486 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515(InterPro)
Hepe02g2982 486 MobiDBLite consensus disorder prediction 372 390 - -
Hepe02g2982 486 MobiDBLite consensus disorder prediction 312 486 - -
Hepe02g2982 486 Gene3D iswi atpase 107 145 - -
Hepe02g2982 486 SMART iq_5 109 131 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2982 Hepe-Chr2:79044009 Hepe09g1233 Hepe-Chr9:15956958 2.84e-34 dispersed
Hepe02g0273 Hepe-Chr2:2662411 Hepe02g2982 Hepe-Chr2:79044009 2.23e-14 transposed
Hepe02g2513 Hepe-Chr2:71787831 Hepe02g2982 Hepe-Chr2:79044009 3.45e-26 transposed
Hepe01g1011 Hepe-Chr1:74744246 Hepe02g2982 Hepe-Chr2:79044009 2.68e-126 wgd
Hepe02g2982 Hepe-Chr2:79044009 Hepe04g0914 Hepe-Chr4:63416213 2.35e-117 wgd
Hepe02g2982 Hepe-Chr2:79044009 Hepe05g0240 Hepe-Chr5:2863966 5.43e-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2982 - - - 0.0