Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2983 | ATGATGTTGCCGCCGCCATCGCCGCCGCCGATGGTGGTTCTCAGCCCGTGCGCCGCCTGTAAGATCCTCCGCCGGAGATGCGTCGATATGTGTGTTTTAGCGCCTTATTTTCCTCCCACCGAGCCTCTCAAGTTCGCCGCCGTGCATAGAATATTTGGAGCTGGCAACGTCATCAAGCTCTTGAAGGAACTCTCTGAAAATCAAAGAGCAGATGCTGCGAGCAGTTTAGTATACGAAGCAAATGCTAGAATTCGAGACCCCGTCTATGGTTGTACGGGCGCAATTTTTCAACTTCAAAATAAAGTAAGCGAGCTCCATGCAGAATTAGCCGTGACAAATGCTGAGATTCATAAGATGCAACTTGAGAATGCAAATTTAGTACCCCTAACTTACACACAAACAAGTAAATTTCAATATCAAGAAGACTCCATCTTGTACCAACAACACTTTCCATTTGAGTTGACTGATTCTAGTCCTCTTCCACATAACAAATCTTCCAACATTGTTTGGGAGGACACATTATGGTCTTGA | 531 | 45.57 | MMLPPPSPPPMVVLSPCAACKILRRRCVDMCVLAPYFPPTEPLKFAAVHRIFGAGNVIKLLKELSENQRADAASSLVYEANARIRDPVYGCTGAIFQLQNKVSELHAELAVTNAEIHKMQLENANLVPLTYTQTSKFQYQEDSILYQQHFPFELTDSSPLPHNKSSNIVWEDTLWS | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 79051994 | 79053480 | + | Hsped.02g29830.1 | Hepe02g2983 | 564484 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2983 | 176 | Coils | Coil | 95 | 122 | - | - | |
Hepe02g2983 | 176 | ProSiteProfiles | LOB domain profile. | 15 | 116 | IPR004883 | - | |
Hepe02g2983 | 176 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 15 | 139 | - | - | |
Hepe02g2983 | 176 | Pfam | Lateral organ boundaries (LOB) domain | 16 | 113 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0884 | Hepe-Chr1:73034843 | Hepe02g2983 | Hepe-Chr2:79051994 | 7.60e-47 | dispersed | |
Hepe02g2983 | Hepe-Chr2:79051994 | Hepe08g0630 | Hepe-Chr8:5603072 | 5.72e-45 | dispersed | |
Hepe02g2983 | Hepe-Chr2:79051994 | Hepe08g0862 | Hepe-Chr8:7832793 | 5.73e-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55151 | PF03195 | LOB | 3.70E-40 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2983 | - | - | - | 0.0 |