Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3012 ATGGACCATTCCGCCGGAATAATGTTGAGTCAGGCGAGGCCATTTATTGCAGTGATTCTTCAGCAGTTCATCACTGCCGGAATGGTCATCATTTCCAAGTTTGCTCTCAATCAGGGACTCAACCAGCACGTTTTAGTCGTCTATCGATACGCCATTGCCACCGTTGTCGTCACTCCTTTCGCTCTCGTCTTCGAAAGGTCTCTCTCCTCTCTCCTCTTTGTCTTTCTCTCTGAGAGAGATTTGTTAACGGTGTACGTTATTGACAGGAAAGTGAGACCGAAGATGACTTGGTCGGTTTTTGGGAAGATTGTGTTGCTCGGACTATTGGAACCTGCACTGGACCAGAACTTGTACTACACGGGCATGAAATATACTACGGCAACTTTCGCGTCTGCTATGACCAATATGGTCCCTGGCCTTGTCTTCCTCATGGCTTGGATTGTCAGGCTGGAGAAGGTTAACATAAGGCAGTTGCAAAGCCAGGCAAAGATATTAGGGACAGTGGTGGCTGTGGGAGGGGCAATGGTAATGACTCTGGTAAGAGGGCCAATCTTGAATCTGCCATGGACAAATCACAACCTCCACCACTCTTCTGCAACTGCAGTCAACCAGCAAGATCTTCTCAAGGGTGCTCTCTTTATCACTACAGGCTGTATTCTTTGGTCTGCTTTTAATGTTCTTCAGGCAATGACAATAAAAGTATACCCGGCGCAACTCTCCTTAACAGCTTTGATATGCTTCACTGGCGCCGTGCAAGCCTCAGTGATAGCTTTGGGAATGGAAGGGCACAACCCTGCTGCCTGGTCATTACGTTTAGATTCCACCCTCTTAGCTCCTTTATACAGTGGAATCATGTCTTCAGGGGTTTCATATACTATTCAAGCAGCAATAATGAAAACGAAAGGGCCAGTTTTTGCAAGTACATTTAGTCCCCTGAGCATGATTATTGTTGCAATCGTTAGTACATTCGCATTATCCGAGATATTATACTTCGGAAGGGTTCTGGGAGCAGCTGTAATAATTACAGGTCTTTATTTAGTTCTGTGGGGCAAAATCAAGGATCAGGCTTCATACAATTCAGATTGTGAGAAGATGGCCCCATCAGATCAGAAACTGACTGCCATAACTGACAAACCGAAGACTTCAGATAAAGAACTTGTAGTTGATCTTGCTAGAATAAAAACAGTGGATGATTCTGTTTGA 1203 45.05 MDHSAGIMLSQARPFIAVILQQFITAGMVIISKFALNQGLNQHVLVVYRYAIATVVVTPFALVFERSLSSLLFVFLSERDLLTVYVIDRKVRPKMTWSVFGKIVLLGLLEPALDQNLYYTGMKYTTATFASAMTNMVPGLVFLMAWIVRLEKVNIRQLQSQAKILGTVVAVGGAMVMTLVRGPILNLPWTNHNLHHSSATAVNQQDLLKGALFITTGCILWSAFNVLQAMTIKVYPAQLSLTALICFTGAVQASVIALGMEGHNPAAWSLRLDSTLLAPLYSGIMSSGVSYTIQAAIMKTKGPVFASTFSPLSMIIVAIVSTFALSEILYFGRVLGAAVIITGLYLVLWGKIKDQASYNSDCEKMAPSDQKLTAITDKPKTSDKELVVDLARIKTVDDSV 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79260776 79263396 - Hsped.02g30120.1 Hepe02g3012 564513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3012 400 PANTHER WAT1-RELATED PROTEIN 16 361 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe02g3012 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 179 - -
Hepe02g3012 400 Pfam EamA-like transporter family 83 177 IPR000620 GO:0016020(InterPro)
Hepe02g3012 400 Pfam EamA-like transporter family 209 348 IPR000620 GO:0016020(InterPro)
Hepe02g3012 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0808 Hepe-Chr1:71931813 Hepe02g3012 Hepe-Chr2:79260776 1.56e-129 dispersed
Hepe02g3012 Hepe-Chr2:79260776 Hepe05g0662 Hepe-Chr5:10907759 6.68e-96 dispersed
Hepe02g3012 Hepe-Chr2:79260776 Hepe02g3014 Hepe-Chr2:79303343 1.31e-105 proximal
Hepe02g3012 Hepe-Chr2:79260776 Hepe04g0877 Hepe-Chr4:63079465 2.40e-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3012 - - - 0.0