Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3014 ATGAACTGTAGCTGTCCTCTTATTATATTGATCTCTTTTTTCACTTTGCTGGAAACTTCTGATTCCCACAACAGCACTTGCTCCACTCAAAGGCTAATTGGAGATGATCAACTTTCTCAGAAAATAAGACCAAAGATGACTCTCCCCATCTTCGTCAAGATTCTTCTACTCGGCTTACTCGAGCCTGTAATAGCCCAAAGCTTGATTTACTCAGGTACTAAGTACACAACTGCAACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCCTTTCTAATGGCTTGGATTTGCAGAATGGAGAAAGTGAATATCAGAAGATTAAGAAGCCAGGCAAAGATTTTAGGCACTTTAGTTACAGTAGGAGGAGCAATGATGATGACTCTTATAAAAGGACCCATGTTGAATTTGCCTTGGACCAAACAGAATTACATTCCTCAATCTTATTCCACCCTTGGAAACAAGCAACAACCTGTTAAGGCTGCCATTGTTATTACCATTTCAAGTATTTGCTCCTCAGCCTTCACCATTCTTCTGGCACATACAATAAGATCATACCCAGCTGAGCTCACACTAACAACTTTCATATGCTTGGCTGGAGCTGTGGAAAGTACTATTTTAGCCTTAGCATTTGAATGGAACAATCCATCTGCATGGGTCTTACATACTGATTCCATACTCTTAGCTGCCCTCTATGGTGGAATAATATCTTCTGGAATTGCTTATTATATCCAAGGAGTGGTGGTGAAGTTAAAAGGACCTGTTTTTGTAACAGCATTCAATCCTCTCAGCATGGTGATAGTTGCAGTCATTAGTTCATTCATATTCGCCGAGAGACTGCGCTTAGGAAGGGTTATTGGAGCAGCTGTGATAATTATAGGGCTTTACTTGGTTCTGTGGGGGAAGAGAAAAGATGAAGTAGTTCCATTCAAAGTGGGGAATGATGAATTGCCAACTTCTTCACACCAAAACTCAACTACCACAAACCTGCAGCTGCAGCTGCAGCCCTCAGATCATCAACATATCCTCAAAGCTGCTGCCCCAACAACAACAATAAGCAATTCCACTGCTTGA 1077 41.32 MNCSCPLIILISFFTLLETSDSHNSTCSTQRLIGDDQLSQKIRPKMTLPIFVKILLLGLLEPVIAQSLIYSGTKYTTATFATAMCNILPAFAFLMAWICRMEKVNIRRLRSQAKILGTLVTVGGAMMMTLIKGPMLNLPWTKQNYIPQSYSTLGNKQQPVKAAIVITISSICSSAFTILLAHTIRSYPAELTLTTFICLAGAVESTILALAFEWNNPSAWVLHTDSILLAALYGGIISSGIAYYIQGVVVKLKGPVFVTAFNPLSMVIVAVISSFIFAERLRLGRVIGAAVIIIGLYLVLWGKRKDEVVPFKVGNDELPTSSHQNSTTTNLQLQLQPSDHQHILKAAAPTTTISNSTA 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79303343 79311141 - Hsped.02g30140.1 Hepe02g3014 564515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3014 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 211 305 - -
Hepe02g3014 358 Pfam EamA-like transporter family 45 128 IPR000620 GO:0016020(InterPro)
Hepe02g3014 358 Pfam EamA-like transporter family 162 300 IPR000620 GO:0016020(InterPro)
Hepe02g3014 358 PANTHER WAT1-RELATED PROTEIN 41 320 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe02g3014 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3014 Hepe-Chr2:79303343 Hepe04g0877 Hepe-Chr4:63079465 3.58e-101 dispersed
Hepe02g3012 Hepe-Chr2:79260776 Hepe02g3014 Hepe-Chr2:79303343 1.31e-105 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3014 - - - 0.0