Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3024 ATGGCCGGTAGAGGAGAAGGTCCAGCGATCGGAATCGATCTCGGGACCACGTACTCTTGCGTCGGAGTCTGGCAGCACGATCGAGTTGAGATCATTGCCAACGACCAGGGCAACCGGACCACGCCGTCGTATGTTGCTTTCACCGACAGCGAGCGATTGATCGGCGATGCCGCCAAGAATCAGGTCGCCATGAACCCTATCAACACCGTTTTCGATGCTAAGCGTTTAATCGGCCGAAGACTTAGCGATTCATCTGTCCAGAGTGATATTAAGCACTGGCCATTCAAAGTTGTTGCCGGCCCTGGTGACAAACCCATGATTGTTGTGGACTACAAGGGTGAGGAGAAGCAGTTTTCAGCAGAAGAGATCTCTTCTATGGTTCTCATTAAGATGAAGGAGATTGCTGAGGCATATCTGGGAACAACAGTGAAGAATGCCGTAGTCACTGTCCCAGCCTACTTCAATGATTCACAGAGGCAGGCCACCAAGGATGCCGGTGTTATTTCTGGTCTAAATGTGATGCGTATCATCAACGAACCAACTGCTGCCGCCATTGCTTATGGTCTTGACAAGAAGGCCACCAGTGTTGGCGAGAAGAATGTTCTAATCTTTGATTTGGGTGGTGGTACTTTTGATGTTTCATTGCTCACAATCGAGGAAGGAATTTTTGAGGTGAAGGCAACTGCAGGAGACACTCATCTCGGTGGTGAGGATTTTGATAACAGATTGGTTAACCACTTCGTGCAGGAGTTCAAGAGGAAGAATAAGAAAGACATTAGTGGAAACCCTAGGGCTCTTAGGAGGTTGAGAACTTCTTGTGAGAGAGCCAAGAGGACTCTATCCTCTACAGCTCAAACTACAATCGAAATTGATTCTTTGTATGAAGGAATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGATCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGTTTGAGAGATGCCAAGATGGACAAAAGCACCATCCATGACGTTGTTCTTGTTGGTGGATCCACTAGGATCCCAAAGGTGCAGCAATTGTTGCAAGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTCCAGGCCGCCATCCTTAGCGGTGAGGGCAACGAGAAGGTTCAGGATCTTCTGCTTCTGGATGTTACCCCTCTTTCTCTTGGACTTGAAACAGCCGGTGGTGTGATGACTGTCTTAATTCCAAGGAATACCACCATCCCCACCAAGAAGGAACAGGTTTTCTCAACTTACTCCGACAACCAGCCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGGGCAAGGACGCGTGACAACAACTTGCTAGGAAAATTTGAGCTCTCTGGCATCCCTCCTGCTCCAAGAGGTGTTCCTCAGATCACAGTCTGCTTTGACATCGATGCCAATGGCATTTTGAACGTTTCTGCTGAGGATAAAACAACAGGGCAGAAGAACAAGATCACAATTACCAATGACAAGGGACGGTTGTCCAAGGAGGAGATCGAGAAGATGGTTGAAGAAGCAGAGAAATACAAGGCTGACGATGAAGAGCACAAGAAGAAGGTTGAATCCAAAAATTCCTTGGAAAACTATGCTTACAACATGAGGAACACCGTGAGGGATGAGAAGTTCAGCTCCAAACTTGACCCAGCAGACAAGAAGAAAATTGAGGATGCCATTGAACAGGCAGTCCAGTGGCTGGACAACAACCAACTTGCTGAGGCCGATGAGTTTGAAGACAAAATGAAGGAGCTTGAGAGTATCTGCAACCCAATTGTTGCCAAGATGTACCAGGGTGCTGGTGGACCGGGCATGGGTGGTGCCGGTATGGACGATGATGATGTTCCCCCTCCCTCCGGTAGCAGTGGTGCTGGCCCCAAGATCGAGGAAGTCGACTAA 1959 47.83 MAGRGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRLSDSSVQSDIKHWPFKVVAGPGDKPMIVVDYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKADDEEHKKKVESKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAVQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGAGMDDDDVPPPSGSSGAGPKIEEVD 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79397967 79400947 + Hsped.02g30240.1 Hepe02g3024 564525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3024 652 FunFam Heat shock 70 kDa protein 197 261 - -
Hepe02g3024 652 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Hepe02g3024 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Hepe02g3024 652 Gene3D - 192 366 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Hepe02g3024 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Hepe02g3024 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Hepe02g3024 652 MobiDBLite consensus disorder prediction 617 652 - -
Hepe02g3024 652 Gene3D - 10 384 - -
Hepe02g3024 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Hepe02g3024 652 FunFam Heat shock protein 70 10 196 - -
Hepe02g3024 652 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Hepe02g3024 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Hepe02g3024 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Hepe02g3024 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 625 IPR029048 -
Hepe02g3024 652 Gene3D - 546 619 IPR029048 -
Hepe02g3024 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Hepe02g3024 652 Coils Coil 518 541 - -
Hepe02g3024 652 FunFam Heat shock 70 kDa 391 545 - -
Hepe02g3024 652 FunFam Heat shock 70 kDa 235 318 - -
Hepe02g3024 652 Coils Coil 576 596 - -
Hepe02g3024 652 FunFam Heat shock 70 kDa protein 71 126 - -
Hepe02g3024 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Hepe02g3024 652 Gene3D - 71 126 - -
Hepe02g3024 652 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Hepe02g3024 652 FunFam Heat shock 70 kDa protein 539 652 - -
Hepe02g3024 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Hepe02g3024 652 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3024 Hepe-Chr2:79397967 Hepe09g0559 Hepe-Chr9:5284491 0.0 dispersed
Hepe02g3024 Hepe-Chr2:79397967 Hepe02g3031 Hepe-Chr2:79433500 8.66e-41 proximal
Hepe01g1515 Hepe-Chr1:80373456 Hepe02g3024 Hepe-Chr2:79397967 8.96e-64 transposed
Hepe03g1313 Hepe-Chr3:69036796 Hepe02g3024 Hepe-Chr2:79397967 1.75e-57 transposed
Hepe05g1544 Hepe-Chr5:65063270 Hepe02g3024 Hepe-Chr2:79397967 2.92e-83 transposed
Hepe06g1470 Hepe-Chr6:65281023 Hepe02g3024 Hepe-Chr2:79397967 1.59e-219 transposed
Hepe09g1220 Hepe-Chr9:15314653 Hepe02g3024 Hepe-Chr2:79397967 6.12e-40 transposed
Hepe06g1471 Hepe-Chr6:65283888 Hepe02g3024 Hepe-Chr2:79397967 1.52e-49 transposed
Hepe02g3024 Hepe-Chr2:79397967 Hepe04g0866 Hepe-Chr4:62915412 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3024 K03283 - csv:101210925 1192.18