Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g3032 | ATGGTTTTCTCTTCAGTTCCTGTGTTTCTTGATCCACCCAATTGGCCTACTCAGCAACCAAATCAGCTCCAAGGAAGTGGCTGCGAGATCACTAATAATACTCAACAACACCTTCCACCTCCGGCACCGCAAGCTGGCGGTGGCGGAGGTAGCGGTGGAGGCGGTGGACCTGGCTCGATTAGACCTGGGTCGATGACGGATCGAGCCAGGATGGCGAAGATACCGCAACCGGAAGCCGGGCTAAAATGCCCTAGATGCGAGTCAACAAACACGAAGTTTTGTTACTTCAACAACTACAGCCTGACTCAGCCACGCCACTTTTGCAAGACGTGCCGACGCTACTGGACGAGAGGAGGGGCGATGAGGAACGTGCCGGTCGGGGGAGGGTGTCGGCGGTCGAGCAAGAGAAGCAGCAGCAGCAGCAAAGGAAATAGGTCAAAATCTCCGGCGGGTTCAAGCACTTCAACAAGCACTGTGTCATCAAACAGTTGCACAACAGATATAATTAGTCACCAAATGGGTCCTCCTCCACCAAACCATTTTCCCTTTTTGGCTCCAAATAATTTACACAATCTGAGTGATTTTGGGAACATTGGTTTAAACTTTGAAGGCCTTCAAATCCCTTCTTCTTCTTCTTCTTCTTCACTGCCAGAATCATCAATTTTATCAAGTGGAGGAATTACAGATCATCATCATCATCATCACCAATGGAAAATTCCCAGCTTTTTTGCAAATTTACATCAACAAAATGGGATGTATTCCAATTTCATGGCGGATCAAGCTGATTTCTCAAATTACCAACGTTTGTCAAAGCCATTATTGGAGACTGGGTTTATTGGTGGTAATAATAATCATAATAGCATGAAAATTATGGATCAGGAGACACAAGCTGCAGGGATTAACAATTTGTCAAGAAATTTTCTGGGAATTCAACCAAATGATCATCAATTCTGGAATTCTACTACTACTACAACAGCAACAGCTGGGAATAATATTGGATGGACGGATCAGATTTCAGATCATTTCAATTCAACTTCTTCCACTTCCCATCTCTTGTAA | 1059 | 44.85 | MVFSSVPVFLDPPNWPTQQPNQLQGSGCEITNNTQQHLPPPAPQAGGGGGSGGGGGPGSIRPGSMTDRARMAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSSSSKGNRSKSPAGSSTSTSTVSSNSCTTDIISHQMGPPPPNHFPFLAPNNLHNLSDFGNIGLNFEGLQIPSSSSSSSLPESSILSSGGITDHHHHHHQWKIPSFFANLHQQNGMYSNFMADQADFSNYQRLSKPLLETGFIGGNNNHNSMKIMDQETQAAGINNLSRNFLGIQPNDHQFWNSTTTTTATAGNNIGWTDQISDHFNSTSSTSHLL | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 79457090 | 79458737 | + | Hsped.02g30320.1 | Hepe02g3032 | 564533 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g3032 | 352 | MobiDBLite | consensus disorder prediction | 209 | 232 | - | - | |
Hepe02g3032 | 352 | Pfam | Dof domain, zinc finger | 81 | 135 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe02g3032 | 352 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 68 | 254 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g3032 | 352 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Hepe02g3032 | 352 | MobiDBLite | consensus disorder prediction | 209 | 226 | - | - | |
Hepe02g3032 | 352 | MobiDBLite | consensus disorder prediction | 11 | 40 | - | - | |
Hepe02g3032 | 352 | MobiDBLite | consensus disorder prediction | 122 | 177 | - | - | |
Hepe02g3032 | 352 | MobiDBLite | consensus disorder prediction | 132 | 172 | - | - | |
Hepe02g3032 | 352 | ProSitePatterns | Zinc finger Dof-type signature. | 83 | 119 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe02g3032 | 352 | ProSiteProfiles | Zinc finger Dof-type profile. | 81 | 135 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3032 | Hepe-Chr2:79457090 | Hepe05g0180 | Hepe-Chr5:2229298 | 5.51e-50 | dispersed | |
Hepe02g3032 | Hepe-Chr2:79457090 | Hepe04g0864 | Hepe-Chr4:62891157 | 1.61e-40 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55154 | PF02701 | zf-Dof | 4.40E-31 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g3032 | - | - | - | 0.0 |