Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g3062 | ATGGAAGTTCCTGCAAGTTTCAGCCCTATCATTATAGCTTTGAGCTTGGCAATAATTATAATCTGCCATTTTCTTCTGAAACTGTTTGTTACAGCAGCACCACCAAACCCTAATTTGCCTCCTGGCTGCATGGGTTTCCCCTTCGTTGGAGAGACTCTAAGCTTCCTCAAGCCTCACCATTCTAACTCCATTGGAACCTTTCTTCAACACCATTGCTCCAGGTTTGGGAAAGTTTTCAAATCTCATCTATTTGGTTCGGCGACGATAGTGTCATGTGATCGAGAGCTAAACATGTTCATTCTTCAAAACGACGATAAGCTTTTCAAAGTGAGTTATCCGAAGGCCATGCATGGTATTCTCGGAAGCAATTCTTTGATTATCGCCGCCGGCGACACTCACCGGAAGCTGAGAAACGTCGTCGTTAGCTTCATCAGCTGGTGCAAGTCCAAACCCACTTTCCTTCACTCCATCGACAACCTCTCTCTGTCTTTAATGGAGTCCTGGAGATCCCAAACCCATGTACTTTTCTGCAAACAAGTCAAAATGTTTGCTCTAAGTGTTATGGTGAAGGAATTGTTGGGCATCAAAGCAAACGAGTCGATAGGGTCAAAGATATTGGAAGAGTTCGAAACATATATGAAAGGTTTTGTTTCTTTGCCTATAAATCTCCCGGGTACTTCATACTCTAATGCTGTCAAGGCTAGGGAGAGGCTTTCTTGCATTGTGAAAGAGATAATGAGAGAGAGGAGAAGGAGGGGATTGGTGAGAACAATGGAAGGGGGTGATGATGAGGACTTTCTAGAAGTGATAATGTCAAATTGGAAGCTTAATGATGAAGAGATTGTGAGTGTTGTGTTGGACATATTGCTTGGAGGTTATGAGACAACAGCTACTCTCATGGGATTGATTGTATATTTTCTTGCACATTCACCTCCCAATGTTCTTGCAAAATTAAAGGAAGAACACCAAGCAATAAGGATTGGTAAAAGGAATGGAGAATATCTCAATTTGGAAGATTACAAGCAAATGGAGTTCACAAGCAATGTGATACATGAAGGCATGAGATGTGGGAATGTGGTCAAGTTTTTACATAGGGAAGCTCTTAAAGATGTCAAATTCAAAGATATTGTCATACCTTCTGGATGGAAAGTTCATCCCGTTTTCTCAGCCGTTCATCTTGATCCAACCCTTCATCCAAATCCTCAACAATTCAATCCTTGGAGATGGACGGGCTCATTCTTCTTCATCTTTCCCAAAACCCTTTCCCCCTTTCTTCTTTCCGCGCCCTTTCACCAGCCGACGTTCACTCATCATCCGTTCGCTGGCCGCTGCCGTCGCTCATCCGCCGTCCATTTTGACGTCCGACGGTCGAATCCACTGCAGCCATGTTTTTTTGTTATTATAAATTTGAGGATGTTCAAGGAGGAGAGCATTGAAGTTAATTCAGCTACTGAACGCAGCCCAAAATCTAGTAAGAAAAGTGCAAAAAGAAAAAACAAGAAGAAGCAGTTATTGATGGAAGGTGTAGATATCATGGAAATGGAAGAGGTAGGATCTGTTCAGCTGGGGGAGAGCAACATGAACTCTGACAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGGGTACTAGACAATGTGTAGAGGAGAGCTCTATCAAGGCTGAGGCAGGAGAATATGAAAGTAAAGCAGAGAGTTTTATGAAAGAGGGTAGTCCTTTCTCTGATGGTGGAAGTGAGAAAAATGAAACTTTTGAAAAGAGGGGAATTGCATTGATAGATGCTGAGAATGAAAGGGCAGACAGCATAGTTAGAGAAAACTCTGGAGGGAAGATTCTAGAGTCTAACAATGGAAAAGCAGAGCAAAGGAATATAAAGAGGAAGAAACGGCTCTTAAAGGAAGCTGCAAATGCAGATATGCGTGGAATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAAAATTTATCTTGTACCCGAGGCTGCTGCAAAGCAAGTACAACGAAAGCGTGCAGGAGGGTTTCGAGGACAATTTTTTTCAGAAGGATGGGTTGAATTTACCGATAAAAGAGTTGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACCAATAGGAGGAAAGAAGAAGTCGTCTTTCTACTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTTACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAAATGGCTTTAGAACTTTCTGCAGCTAAGAGGGATAGTAGTTCCTATCTTTCTAAAGTCGATAAATCACATGCATTGAATGCCATCGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGGAGATTCAGAAATGAATTCTGAAGTTGCTGATAGCCAGAAACTTCCAAAACTGATCCGCAACTTCCCACAAACACAACCAGTTGCAGATTCTGCAGCACAAGACAAACCGAGACTATCTAAAAGTACCCTGGCTGGGGTGTTCGGAAGTTCCTAG | 2553 | 42.22 | MEVPASFSPIIIALSLAIIIICHFLLKLFVTAAPPNPNLPPGCMGFPFVGETLSFLKPHHSNSIGTFLQHHCSRFGKVFKSHLFGSATIVSCDRELNMFILQNDDKLFKVSYPKAMHGILGSNSLIIAAGDTHRKLRNVVVSFISWCKSKPTFLHSIDNLSLSLMESWRSQTHVLFCKQVKMFALSVMVKELLGIKANESIGSKILEEFETYMKGFVSLPINLPGTSYSNAVKARERLSCIVKEIMRERRRRGLVRTMEGGDDEDFLEVIMSNWKLNDEEIVSVVLDILLGGYETTATLMGLIVYFLAHSPPNVLAKLKEEHQAIRIGKRNGEYLNLEDYKQMEFTSNVIHEGMRCGNVVKFLHREALKDVKFKDIVIPSGWKVHPVFSAVHLDPTLHPNPQQFNPWRWTGSFFFIFPKTLSPFLLSAPFHQPTFTHHPFAGRCRRSSAVHFDVRRSNPLQPCFFVIINLRMFKEESIEVNSATERSPKSSKKSAKRKNKKKQLLMEGVDIMEMEEVGSVQLGESNMNSDSDKVKKKKKRKKGTRQCVEESSIKAEAGEYESKAESFMKEGSPFSDGGSEKNETFEKRGIALIDAENERADSIVRENSGGKILESNNGKAEQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQKIYLVPEAAAKQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEPIGGKKKSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALELSAAKRDSSSYLSKVDKSHALNAIEERLKKKQKLRGDSEMNSEVADSQKLPKLIRNFPQTQPVADSAAQDKPRLSKSTLAGVFGSS | 850 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 79779298 | 79788799 | + | Hsped.02g30620.1 | Hepe02g3062 | 564563 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g3062 | 850 | SUPERFAMILY | RNA-binding domain, RBD | 632 | 724 | IPR035979 | GO:0003676(InterPro) | |
Hepe02g3062 | 850 | PANTHER | CYTOCHROME P450 26 | 38 | 444 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Hepe02g3062 | 850 | SUPERFAMILY | Cytochrome P450 | 36 | 412 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Hepe02g3062 | 850 | MobiDBLite | consensus disorder prediction | 479 | 505 | - | - | |
Hepe02g3062 | 850 | Gene3D | - | 609 | 727 | IPR012677 | - | |
Hepe02g3062 | 850 | Pfam | Cytochrome P450 | 40 | 410 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Hepe02g3062 | 850 | CDD | RRM_ABT1_like | 642 | 739 | IPR034353 | - | |
Hepe02g3062 | 850 | Gene3D | Cytochrome P450 | 32 | 442 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Hepe02g3062 | 850 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 642 | 724 | IPR000504 | GO:0003723(InterPro) | |
Hepe02g3062 | 850 | MobiDBLite | consensus disorder prediction | 520 | 551 | - | - | |
Hepe02g3062 | 850 | SMART | rrm1_1 | 643 | 729 | IPR000504 | GO:0003723(InterPro) | |
Hepe02g3062 | 850 | MobiDBLite | consensus disorder prediction | 795 | 850 | - | - | |
Hepe02g3062 | 850 | PRINTS | E-class P450 group I signature | 387 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Hepe02g3062 | 850 | PRINTS | E-class P450 group I signature | 280 | 297 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Hepe02g3062 | 850 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3062 | Hepe-Chr2:79779298 | Hepe07g0673 | Hepe-Chr7:7823065 | 4.03e-68 | dispersed | |
Hepe02g3062 | Hepe-Chr2:79779298 | Hepe03g1471 | Hepe-Chr3:71482274 | 3.00e-63 | transposed | |
Hepe02g3062 | Hepe-Chr2:79779298 | Hepe02g1478 | Hepe-Chr2:19193017 | 1.41e-62 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g3062 | K12639 | - | csv:101215045 | 626.706 |