Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3073 ATGGGGTCCGGTAATGAATTTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTCGATCCGAAGCAAATCTTTGTTGGGCCAAGGATTGGGGAGGGCGCGCATGGAAAAGTGCATAAGGGGAAATACAAAGACCAAAATGTTGCTATTAAAATAATACGAAGAGGTGAAACCCCAGAAGAAATTGCAAAAGTTGAGGCACGCTTTGCCCGGGAGGTTGCTATGTTATCCAAAGTTCAGCACAAGAATCTCGCGAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTCAGGCGGTACATTACGGAAGTACCTGTTGAGTATGCGGCCAAGGTGCTTGGACTTGCATGAGGCGGTTGGCTTCGCACTCGATATTGCACGTGCAATGGAATGCCTGCATTCCCATGGTATCATTCACCGTGATCTCAAACCTGAGAATTTGATCTTAACTGCAGACCACAAAACTGTTAAGCTTGCCGACTTTGGTCTCGCTAGAGAAGAGTCGGTAACAGAGATGATGACAGCTGAAACCGGGACATACAGATGGATGGCTCCAGAGCTATACAGTACAGTCACTTTAAGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTGTTCTGGGAGGTTGTCCAAAATAAGTTGCCTTTTGAAGGCATGTCGAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTAAGACCGAGTGCCGAGAACTTCCCAGAGGATTTAGCCCCAGTTGTGACTTCCTGTTGGATGGAGGATCCGAATGCTCGGCCTAACTTCAGCCAAATCATACAGATGCTCTTGAAATATCTTTCCACCATTCCACAACCAGAGTATGTTACACCACCAACAACAATGCACCCGCCTGAGAATGCAGTGCTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAACCACAAGACGTGGCACCGGGGAAGTCCCGAGCAGCGAGATGGAAGAGAAACCAAGCAGTTTCTTCTCCTGTTTCACTGGTAACTGTTACTGA 1062 46.23 MGSGNEFSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHKGKYKDQNVAIKIIRRGETPEEIAKVEARFAREVAMLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSMRPRCLDLHEAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEVVQNKLPFEGMSNLQAAYAAAFKNLRPSAENFPEDLAPVVTSCWMEDPNARPNFSQIIQMLLKYLSTIPQPEYVTPPTTMHPPENAVLPPESPGTSSLMATTRRGTGEVPSSEMEEKPSSFFSCFTGNCY 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79888743 79892822 - Hsped.02g30730.1 Hepe02g3073 564574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3073 353 PANTHER SERINE-THREONINE PROTEIN KINASE 19 285 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe02g3073 353 Gene3D Transferase(Phosphotransferase) domain 1 104 298 - -
Hepe02g3073 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 PRINTS Tyrosine kinase catalytic domain signature 100 113 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 PRINTS Tyrosine kinase catalytic domain signature 138 156 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 PRINTS Tyrosine kinase catalytic domain signature 212 234 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 PRINTS Tyrosine kinase catalytic domain signature 255 277 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 SUPERFAMILY Protein kinase-like (PK-like) 16 319 IPR011009 -
Hepe02g3073 353 SMART serkin_6 24 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 Gene3D Phosphorylase Kinase; domain 1 12 103 - -
Hepe02g3073 353 ProSitePatterns Protein kinases ATP-binding region signature. 30 51 IPR017441 GO:0005524(InterPro)
Hepe02g3073 353 MobiDBLite consensus disorder prediction 313 331 - -
Hepe02g3073 353 MobiDBLite consensus disorder prediction 301 341 - -
Hepe02g3073 353 CDD STKc_MAP3K-like 30 284 - -
Hepe02g3073 353 Pfam Protein tyrosine and serine/threonine kinase 29 284 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 FunFam Kinase suppressor of Ras 1 13 103 - -
Hepe02g3073 353 ProSiteProfiles Protein kinase domain profile. 24 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3073 353 PIRSF TyrPK_CSF1-R 114 343 - -
Hepe02g3073 353 PIRSF TyrPK_CSF1-R 10 117 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3073 Hepe-Chr2:79888743 Hepe05g0029 Hepe-Chr5:289635 6.98e-145 dispersed
Hepe02g1774 Hepe-Chr2:25411598 Hepe02g3073 Hepe-Chr2:79888743 6.36e-148 wgd
Hepe02g3073 Hepe-Chr2:79888743 Hepe09g0241 Hepe-Chr9:2088187 6.99e-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72611 PF07714 PK_Tyr_Ser-Thr 8.90E-59 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3073 - - - 0.0