Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3102 ATGGCTGGGAATATTTTGATTGATTATAATGGTGCAGTCAAGTTAGCTGATTTTGGAGTCTCCGCTTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACATTTGTCGGAACTCCTTGCTGGATGGCACCTGAAGTTATGCAGCAATTACATGGATATGACTTCAAGGCAGACATTTGGTCATTTGGAATAACAGCACTTGAACTGGCTCATGGGCATGCTCCATTTTCAAAATACCCACCAATGAAAGTTTTGCTAATGACATTACAAAATGCTCCTCCTGGTCTTGATTATGAAAGAGATAGGAGATTTTCTAAGTCGTTCAAAGAAATGGTCGCTACATGCCTAGTGAAGGATCCAAAGAAACGACCAAGTTCAGAGAAGCTCTTAAAGCACCCTTTTTTCAAACAGGCCCGTCCAGTTGATTATCTTGCTCGAACAATCCTGGATGGCCTTGCTCCATTAGGGGAACGGTTTAAGAAGCTAAAGGCAAAAGAGGCAGATCTTCTGGGGCAGAACAAGGCTTTATATGGGGAGGAGCATTTGTCACAGCAAGAGTATATTCGAGGAATTAGTGCCTGGAACTTCAATCTCGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGACGATATGTCAAACTTGGAAGATCTAGATGTACATACAACAAAGCAAAGAAACAAGAATAATGATTTTAGCTTTCCAGTAGAAGGTTCATCCTTTGAAAGGCTGAATCACCCAACTGCTGCAGCTAGTCAGGAGGATGGTTTCAATGATCTTCATGATTTGGAGAGTTCCCTTGCTTCTTTCCCTATGAAACCTCTTGAAGCACTCAAAGATTGTTTTGACATCTATGAAGATATAAGCACAGACAGTATAAGGCCAGTGGATAGAGAAAATGGAAGAACCGAGGGTGAGAGTTCAGGGCAAAGTGGTTCATTACCACGTCAATACATGTTAGAGAATAAGAGGTCTTTCAGCGGTTCACTAATTTCTGACAATGCTGTTTCTCCTAAAAAGATTATTGTCGATGGTGATAGGGACTATTTGCAGTCAAAACTTCCATCTGAGCGTAATTACAGTGGTCCATTATTATATCGCCAGAAAAGAGATACAAATAACGTTTCATCTGTCGAGGATACATCAGATGGAACTGTTGTTCAACGCAAGGGGCGGTTTAAAGTTACTTCGGCAGAGCTCAGTCCGAAGGGTCCTATGACAGGCTCATTTAGCCCAGTCTGTGGAGGGACGATAAGTCCAACATCCCTGAACCTAATGCCTGCTCTACTCCTCCCATCGATGCAATGCATTTTGCAGCAGAACATCCTGCAACGGGAAGAAATTGTTAAATTGATCAAGTATTTGGAACAAATGACTGGCAAGAATCCAGATGTATCAGAGACCAGTGACCTTCTGCAGATACAACCGGCTTCATTGAGGGAAAGAGAGTTGCATTCTCAGGTCGTTCATCTGCAACAGAGAATTGATAATCTCGTCGAGGAATTAGAGAAGCAGAAGTTGAAAAATGCCGAGTTTGAAAGACACGTGATTTCCATGGCAAATAAGGAGAGAACATAA 1587 42.03 MAGNILIDYNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVATCLVKDPKKRPSSEKLLKHPFFKQARPVDYLARTILDGLAPLGERFKKLKAKEADLLGQNKALYGEEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNLEDLDVHTTKQRNKNNDFSFPVEGSSFERLNHPTAAASQEDGFNDLHDLESSLASFPMKPLEALKDCFDIYEDISTDSIRPVDRENGRTEGESSGQSGSLPRQYMLENKRSFSGSLISDNAVSPKKIIVDGDRDYLQSKLPSERNYSGPLLYRQKRDTNNVSSVEDTSDGTVVQRKGRFKVTSAELSPKGPMTGSFSPVCGGTISPTSLNLMPALLLPSMQCILQQNILQREEIVKLIKYLEQMTGKNPDVSETSDLLQIQPASLRERELHSQVVHLQQRIDNLVEELEKQKLKNAEFERHVISMANKERT 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 80162758 80180047 - Hsped.02g31020.1 Hepe02g3102 564603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3102 528 Gene3D Transferase(Phosphotransferase) domain 1 2 170 - -
Hepe02g3102 528 SUPERFAMILY Protein kinase-like (PK-like) 3 157 IPR011009 -
Hepe02g3102 528 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3102 528 MobiDBLite consensus disorder prediction 296 320 - -
Hepe02g3102 528 Coils Coil 484 518 - -
Hepe02g3102 528 Pfam Protein kinase domain 4 137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3102 528 SMART serkin_6 1 137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3102 528 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 514 IPR047173 GO:0043539(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3102 Hepe-Chr2:80162758 Hepe06g0942 Hepe-Chr6:57015303 2.99e-101 dispersed
Hepe02g1817 Hepe-Chr2:27204815 Hepe02g3102 Hepe-Chr2:80162758 6.21e-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72612 PF00069 Pkinase 4.50E-28 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3102 K08835 - csv:101205102 987.252