Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3108 ATGAACCCACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCGAAACAAGAATGCAAAAACATCTTCGCGACGCGAGGATGCAAGTTTTGCCTGGCCATCCTCGACAGTTCTTACTCACAAAGGCTCCACCAAGAAAGATGCCAATTCTCGGGGGCTTCTTTCTCGGTTGGCCAACTTGGGAATTCGTGACGGTTCGACCGTCGTCGACGGTGGACGAACTCGAGGCTCCGGCGCAGTGGCATTAGCTTGCAAATATGTAGGTGGCGGCAGTGATGGGTCGCTGGACATATGCGCCAAAGTCTGCCTTATTGATGAGAGCGAAAATGTCATCTTTTATAGCTATGTCAAGCCAATAACTCTTGTTACAAATTATAGGTATGAAACGACGGGTATTCGTCCAGAACACTTTCGAGATGCAATGCCGCTGAAGCAAGTTCAAAAGAAAATTCAAGACATCCTCTACAATGGAGGTGATAAGGCTAGGGTTCTTGTGGGTTACTGTGTGGAAGACGATCTGAAACGCTTACAAATCGGATATGCGTCCATCATGATAAGGGACACAGCCAATTATCCACCATTGATGAAGACAAGCAAGCTATGCAATTCACTCAAGTATCTAGCTCAAGTATTTGAGATTCAAAATGGGATACAAGATCCCTATGAAGATTGCGTTGCAGCCATGAGGCTTTACAAGAGAATGAGATCACAAGTTCATAAGAAAGAGGATCACCCAATGGCTTCTGAACCACAAAACAAAAATAAATTTGCAGTTTGGAGGGAAAATGAGCTTGAGAGGATGAGCCCACAACAGATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGACTTCAATTAA 903 44.3 MNPLVPFARNIVDLLILLENISLGHCRNKNAKTSSRREDASFAWPSSTVLTHKGSTKKDANSRGLLSRLANLGIRDGSTVVDGGRTRGSGAVALACKYVGGGSDGSLDICAKVCLIDESENVIFYSYVKPITLVTNYRYETTGIRPEHFRDAMPLKQVQKKIQDILYNGGDKARVLVGYCVEDDLKRLQIGYASIMIRDTANYPPLMKTSKLCNSLKYLAQVFEIQNGIQDPYEDCVAAMRLYKRMRSQVHKKEDHPMASEPQNKNKFAVWRENELERMSPQQMLEISRSDYYCWCMDFN 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 80245079 80247324 + Hsped.02g31080.1 Hepe02g3108 564609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3108 300 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 55 298 IPR047021 GO:0004527(PANTHER)|GO:0004527(InterPro)|GO:0005634(PANTHER)
Hepe02g3108 300 SMART exoiiiendus 90 252 IPR013520 -
Hepe02g3108 300 CDD REX4_like 92 244 IPR037431 GO:0006364(InterPro)|GO:0008408(InterPro)
Hepe02g3108 300 Gene3D - 88 268 IPR036397 GO:0003676(InterPro)
Hepe02g3108 300 SUPERFAMILY Ribonuclease H-like 105 249 IPR012337 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3108 Hepe-Chr2:80245079 Hepe06g2010 Hepe-Chr6:71252127 3.38e-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3108 - - - 0.0