Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3120 ATGGTGGAAATATATAATAGCCCTTGGGGTTGGGGAAGAACAGAGGAAGCAGAGAGAAAGCAGAGAGATATGGCGGGAAGTCGAAGTGGAAGATACAGCTTAATCGAAGGAGTTGTGCCATTTCCGGCGATGATAACAATGGAGTGTATCAACGTCGGACTCAACACTCTGTTCAAAGCCGCCACCGCCACCGGGATGAGCCACCATGTCTTCGTCGTCTATTCTTACTCCCTCGCCGCCCTCATCCTCCTCCCATCTCCGTTCATCTCTCGAAGATCCCGGCGACTTCCACCGCTGAATTTCTCTATACTTTCGAAGATCGCAGTTCTGGGAGTGATCGGTTCTTCGTCGCAGATTATGGGATACACGGGAATTAATTACAGTTCTCCGACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACCATAATATCAATATCAGGTGCATTTGTAGTCACTCTTTACAAGGGTCCAAGCATCATATTCTCTTCAGCACCAATCTCTCTTTCCCTTCACCACCCACTAACCTCTTCAGATTCTAATTGGGTCCTTGGCAGCCTTCTCTTGACTGCTGAGTACATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAACCTAACTGTGGCCTTCATAGCTGCAGTTGTAGGTGTGATTTTAGAGAGAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCCTTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGCTTAAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCGGTGTTCGTAGCGATGTTTAAGCCGTTGTCGATTGTTGTCGCTATTGTAATGGGTGTTCTGTTTCTTGGCGATTCTCTACATCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGAAAAGCAAAAGAAGAAATGGGTGATGAAGAAGAAAAAGAAGAAGGCCATAACCATAATCTTACTGCTAACAAGGAATCACATGGAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACACACAGAGATACAGTTCAGACCATGTGTGA 1203 44.72 MVEIYNSPWGWGRTEEAERKQRDMAGSRSGRYSLIEGVVPFPAMITMECINVGLNTLFKAATATGMSHHVFVVYSYSLAALILLPSPFISRRSRRLPPLNFSILSKIAVLGVIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPSIIFSSAPISLSLHHPLTSSDSNWVLGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAFIAAVVGVILERDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLHLGSLIGASIISIGFYTVMWGKAKEEMGDEEEKEEGHNHNLTANKESHGDQRVPLLGSYNTQRYSSDHV 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 80370433 80375927 + Hsped.02g31200.1 Hepe02g3120 564621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3120 400 Pfam EamA-like transporter family 226 350 IPR000620 GO:0016020(InterPro)
Hepe02g3120 400 Pfam EamA-like transporter family 52 181 IPR000620 GO:0016020(InterPro)
Hepe02g3120 400 PANTHER WAT1-RELATED PROTEIN 43 364 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe02g3120 400 MobiDBLite consensus disorder prediction 358 385 - -
Hepe02g3120 400 MobiDBLite consensus disorder prediction 358 377 - -
Hepe02g3120 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 78 184 - -
Hepe02g3120 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1869 Hepe-Chr2:29421118 Hepe02g3120 Hepe-Chr2:80370433 1.49e-96 dispersed
Hepe02g1870 Hepe-Chr2:29435688 Hepe02g3120 Hepe-Chr2:80370433 3.31e-95 dispersed
Hepe02g3120 Hepe-Chr2:80370433 Hepe04g0525 Hepe-Chr4:57940368 2.58e-56 dispersed
Hepe02g3119 Hepe-Chr2:80345134 Hepe02g3120 Hepe-Chr2:80370433 1.58e-84 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3120 - - - 0.0