Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3121 ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGAAATTGAATCACGACCTCACATTACCCTCTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCATCGTTAAAAATTTTGCTTCTAAACAGGAACCCTTGCCTTTGTCCTTATCGTCAATTGGGAGTCTTCCCAGTGATAACAACATTCTCTTTCTCGGTCCAGCGCCGTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGGGAGGAATATCGCCTTGGCTCGTGGATTCCACATTGCTCTGTTGCTCAGGAGGTCCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTCGAATTTTCCCCTGTTCGGGAGTTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGA 552 45.83 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCSVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 80378636 80380119 + Hsped.02g31210.1 Hepe02g3121 564622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3121 183 Pfam 2'-5' RNA ligase superfamily 40 164 - -
Hepe02g3121 183 PANTHER - 1 182 - -
Hepe02g3121 183 SUPERFAMILY LigT-like 5 155 IPR009097 -
Hepe02g3121 183 Gene3D Cyclic phosphodiesterase 5 178 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3121 - - - 0.0