Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3154 ATGGGTTTGGCGCCGAATGACTCGAAGGTCGAGACTTGGATTGAGGGAAAGTCAAGAATAGCTAGCGAGAAGAAGAAGAAGAAGGAAAATGAGTTGGAGGAGGAGACTGGATGTTGGGTTAAGTTGAAGTTCATTGGGAGTTGCATTCCTTCTAGATCAAAGGTTGATAGTTCTTTAAGTGGATCAAAGGTTGATAGCTTCATCAGTGGCGCTAGTACTCATTGCGATAGTAAATCTAGACTCAATGAAAAAAGAGATATTCTGGTTACAACATTGGGATCATCAGCAACAACTGATAATGCTGAAAGTAGCTCGTCCACGCCCAAGCTTAGTGCGGAGCTGAAGGTTGCTTCTCGGCTTCGTAAGTTCACTTTTAATGAGCTTAAGTTAGCCACCAGAAATTTTCGACCTGAGAGCCTACTCGGCGAGGGAGGTTTTGGTTGTGTTTTCAAAGGATGGATTGAAGAGAATGGAACTGCTCCTGCTAAACCTGGAACTGGGCTTACAGTTGCAGTCAAGACTCTTAATCATGACGGTCTACAAGGTCACAAAGAATGGATGGCTGAAGTTATGTTCCTTGGTGACCTCAACCATTCTAATCTTGTGCGGTTGATTGGTTGCTGCATTGAAGATGATCAAAGGTTATTAGTTTATGAGTTCATGCCTCGTGGAAGTTTGGAGAACCACCTCTTTAGAAAAGGGCCCTTGCCACTTCCTTGGTCCATTAGAATGAAAATTGCTCTTGGTGCTGCTAAAGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGACCAGTGATATATCGTGATTTTAAAACGTCTAATATTTTATTAGATGCGGATTACAACGCTAAACTCTCAGATTTTGGACTTGCAAAAGATGGTCCTGAGGGCGACAAAACTCATGTTTCAACTCGGGTTATGGGAACCTATGGTTATGCAGCTCCAGAATATGTGATGACTGGGCATTTGACATCAAAAAGCGATGTCTACAGTTTTGGAGTTGTCATGCTCGAAATGCTAACTGGTCGAAGATCGATGGATAAAAATAGACCGAATGGGGAGCACAACCTTGTTGAATGGGCTAGACCCCTACTTGGAGACAAGAGGAAGTTCTACCGGCTGATAGATCCTCGCCTCGAATGTCACTTCTCGATCAAAGGTGCACAAAAAGCTGCAGAGCTTGCAGCTCACTGCCTTAGTAGAGATCCTAAAGCCAGACCTGTGATGAGTGAAGTTGTTGAAACTTTAAAACCTTTGCCAAACCTTAAGGACATGGCGAGTTCTTCCTATTACTTCCAAACCATGCAATCCGAGCGTGCTAGGTCCAACCCCAATGCTAAAAGTGTCGTCCGCACACAGTCGATGTTTGTGGCAAGGAACGGGCAACACATTAGAAGCTTATCAAGTCCAAATGGTCCTCATGCTTCTCCATATAATTATCCTCAGCAGTCACCAAAACCTGACAGGAGATAA 1473 43.79 MGLAPNDSKVETWIEGKSRIASEKKKKKENELEEETGCWVKLKFIGSCIPSRSKVDSSLSGSKVDSFISGASTHCDSKSRLNEKRDILVTTLGSSATTDNAESSSSTPKLSAELKVASRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPAKPGTGLTVAVKTLNHDGLQGHKEWMAEVMFLGDLNHSNLVRLIGCCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVMLEMLTGRRSMDKNRPNGEHNLVEWARPLLGDKRKFYRLIDPRLECHFSIKGAQKAAELAAHCLSRDPKARPVMSEVVETLKPLPNLKDMASSSYYFQTMQSERARSNPNAKSVVRTQSMFVARNGQHIRSLSSPNGPHASPYNYPQQSPKPDRR 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 80951236 80956915 + Hsped.02g31540.1 Hepe02g3154 564655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3154 490 Gene3D Transferase(Phosphotransferase) domain 1 221 440 - -
Hepe02g3154 490 ProSiteProfiles Protein kinase domain profile. 135 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3154 490 FunFam Serine/threonine-protein kinase BIK1 102 220 - -
Hepe02g3154 490 Pfam Protein tyrosine and serine/threonine kinase 139 416 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3154 490 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524(InterPro)
Hepe02g3154 490 FunFam Probable serine/threonine-protein kinase PBL8 221 437 - -
Hepe02g3154 490 PANTHER OS01G0588500 PROTEIN-RELATED 106 420 IPR050823 -
Hepe02g3154 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3154 490 SUPERFAMILY Protein kinase-like (PK-like) 112 416 IPR011009 -
Hepe02g3154 490 MobiDBLite consensus disorder prediction 453 490 - -
Hepe02g3154 490 CDD STKc_IRAK 141 419 - -
Hepe02g3154 490 MobiDBLite consensus disorder prediction 453 483 - -
Hepe02g3154 490 Gene3D Phosphorylase Kinase; domain 1 110 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3154 Hepe-Chr2:80951236 Hepe09g0655 Hepe-Chr9:6183554 5.47e-170 dispersed
Hepe10g1715 Hepe-Chr10:53888687 Hepe02g3154 Hepe-Chr2:80951236 9.46e-242 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72615 PF07714 PK_Tyr_Ser-Thr 1.20E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3154 - - - 0.0