Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3191 ATGGCTAACAAGGACGACTCTTCTGCCAGACCTCCACTCCAGCGCCCCACTATTACTCTACCTCCACGCCCTTCCATGGAGGCTTTTTTCGCCTCCGGACCTACTGGCCTTAGCCCTGGCCCCATGACTCTCGTCTCCAGCTTCTTCGCCGACGCTGGCGTTGACTCACCCTCCTTCTCTCAGCTTCTCGCCGGAGCCATGGGCTCTCCGATGGCTATGGGCTTTTTGGGAACTGGGTCTGGTGGCGCCTCGGAATTGGAATTTGGGATGAAGCAATCGAAGCCGCTGAATTTGCTGGTGGCTCGGTCTCCTTTGTTCTCGGTTCCGCCGGGCCTCAGCCCTTCTGGCTTGCTTAATTCGCCGGGGTTTTATCCTCCTCAGAGTCCATTCGGAATGTCACACCAGCAGGCATTGGCTCAGGTTACTGCTCAAGCGGCACTAGCACACTCTCATATGCATATGCAGCAAGCTGAATATCAACATTCTTCGGTTCCAGCTCCTATGGAACCATTGACACGTGATCCATCATTTTCTCTTGATGAAGCATCTCAACAGTCAATATTACCCTCCACATCAGACACAATAAGTTTCATTGCAGAATCAACGGAAGTCTCTCATTCTGATAGAAAATACCAACCTCCTCCTTCCCATGCCTCTGATAAACCTGCAGATGATGGCTATAACTGGCGTAAATATGGACAGAAGCTGGTTAAGGGCAGTGAATATCCACGTAGCTATTACAAATGCACGCATTTGAATTGCCCCGTTAAAAAGAAGATTGAGCGCTCACCTGATGGTCAAATTACTGAAATTATTTACAAAGGCCAGCACAACCATGAACCTCCTCCAGCCAACAAACGTGCAAGAGATAATAGTGAACCAACTGGGTGTACAAATTCTTTGATGAAGCCCGAATGTGGTTCGCAAAATCAAGCTAGAATTTTGAACAGGTCAAGTGAAAATGTGCAATTAGGGTCTAGTGACAGTGAAGAACAAGCTGATACAGAGATAACGGATGACAGAGAGGAAGATGAGCGAAATCCAAAGAGGCAGAACATTGACGCAGGGACATCTGGTGTTGCCTTGTCACATAAAACACTCACAGAACCAAAAATCATTGTTCAAACAAGAAGTGAGGTTGACCTGTTAGATGACGGTTATAGGTGGCGCAAGTATGGGCAGAAAGTGGTTAAAGGAAATCCTAACCCTAGGAGCTACTACAAATGCACTAGTGCTGGGTGCAACGTCCGAAAGCATGTCGAGAGGTCTTCAACAGACTCGAAGGCTGTCGTAACTACATACGAAGGGAAACATAACCATGATGTCCCTGCAGCTAGAAACAGCAGCCACCACACAGCCAGCAATACTATGACCCAGATCAAACCGCATAAAGTTGTAGCTCAGAAACATCCATTACTTAAAGAGATGGAATTTGGAACTAATGACCAGAGACCTGCCGTTTTGCGGCTTAAAGAAGAGCAAATCACCGTGTAA 1494 47.52 MANKDDSSARPPLQRPTITLPPRPSMEAFFASGPTGLSPGPMTLVSSFFADAGVDSPSFSQLLAGAMGSPMAMGFLGTGSGGASELEFGMKQSKPLNLLVARSPLFSVPPGLSPSGLLNSPGFYPPQSPFGMSHQQALAQVTAQAALAHSHMHMQQAEYQHSSVPAPMEPLTRDPSFSLDEASQQSILPSTSDTISFIAESTEVSHSDRKYQPPPSHASDKPADDGYNWRKYGQKLVKGSEYPRSYYKCTHLNCPVKKKIERSPDGQITEIIYKGQHNHEPPPANKRARDNSEPTGCTNSLMKPECGSQNQARILNRSSENVQLGSSDSEEQADTEITDDREEDERNPKRQNIDAGTSGVALSHKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERSSTDSKAVVTTYEGKHNHDVPAARNSSHHTASNTMTQIKPHKVVAQKHPLLKEMEFGTNDQRPAVLRLKEEQITV 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 81462853 81467821 - Hsped.02g31910.1 Hepe02g3191 564692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3191 497 FunFam WRKY transcription factor 33 370 436 - -
Hepe02g3191 497 ProSiteProfiles WRKY domain profile. 378 443 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 MobiDBLite consensus disorder prediction 1 33 - -
Hepe02g3191 497 Gene3D WRKY domain 368 444 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 Gene3D WRKY domain 215 283 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 MobiDBLite consensus disorder prediction 274 362 - -
Hepe02g3191 497 SMART WRKY_cls 383 442 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 SMART WRKY_cls 223 281 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 MobiDBLite consensus disorder prediction 291 331 - -
Hepe02g3191 497 FunFam WRKY transcription factor 212 283 - -
Hepe02g3191 497 Pfam WRKY DNA -binding domain 384 441 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 ProSiteProfiles WRKY domain profile. 218 282 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 SUPERFAMILY WRKY DNA-binding domain 221 282 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 SUPERFAMILY WRKY DNA-binding domain 375 443 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g3191 497 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 156 462 IPR044810 GO:0003700(InterPro)
Hepe02g3191 497 MobiDBLite consensus disorder prediction 155 228 - -
Hepe02g3191 497 MobiDBLite consensus disorder prediction 177 202 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3191 Hepe-Chr2:81462853 Hepe06g1242 Hepe-Chr6:62187790 4.12e-75 dispersed
Hepe09g0577 Hepe-Chr9:5380043 Hepe02g3191 Hepe-Chr2:81462853 1.28e-46 transposed
Hepe10g1775 Hepe-Chr10:54519892 Hepe02g3191 Hepe-Chr2:81462853 1.82e-141 wgd
Hepe02g3191 Hepe-Chr2:81462853 Hepe08g0694 Hepe-Chr8:6248899 2.71e-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55169 PF03106 WRKY 3.20E-25 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3191 - - - 0.0