Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3214 ATGAATGCGAATAGTTCTCGATTTCAGTCGTTTGGTCAGACTGAGATTAACTGGGACAAGCTTGATAAATCAAAATTTTATGGCGTAGGAGCTGGTCTCTTTACTGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAGAATGCATTGGCTGTTATTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTCGGCACTGTAATCACTGGTGCAATTCCTGCAAGGATTATCTTTCTTACCGCTTTGGAGACGATCAAAGTGGGGGCCTTTCAAATGGTTGAGCCATTGAAATTTTCTGAACCCACACAAGCGGCATTAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATCGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGCAATACAAGATATAATGGGGGTTTAGATGTCGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGTTTTCTAGGCCAAACCTCTGCTTCTGAGGAATTTGCTCCTAGCCATGCCCAACTTATTTCAGTTCAAGCAGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAGAGGGAAGACAGCAAGACAAATTGTTGAAACCTTAATCGCGGAGGATGGATGGAAAGGTTTTTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCGGCCTGGGGAACCTCGATGATAATTGCTTACGAGTACCTGAAGCGGCTGTGTGCAAAAGATGAACAGAATTGA 966 44.2 MNANSSRFQSFGQTEINWDKLDKSKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALAVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETIKVGAFQMVEPLKFSEPTQAALANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWSFLGQTSASEEFAPSHAQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDRGKTARQIVETLIAEDGWKGFYRGLGPRFFSMSAWGTSMIIAYEYLKRLCAKDEQN 321
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 81683422 81692189 - Hsped.02g32140.1 Hepe02g3214 564715
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3214 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 314 IPR018108 -
Hepe02g3214 321 SUPERFAMILY Mitochondrial carrier 19 311 IPR023395 -
Hepe02g3214 321 Gene3D Mitochondrial carrier domain 36 321 IPR023395 -
Hepe02g3214 321 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 320 - -
Hepe02g3214 321 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085(InterPro)
Hepe02g3214 321 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085(InterPro)
Hepe02g3214 321 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085(InterPro)
Hepe02g3214 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 107 IPR018108 -
Hepe02g3214 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Hepe02g3214 321 FunFam Mitochondrial substrate carrier family protein 27 318 - -
Hepe02g3214 321 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Hepe02g3214 321 Pfam Mitochondrial carrier protein 30 106 IPR018108 -
Hepe02g3214 321 Pfam Mitochondrial carrier protein 235 317 IPR018108 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1906 Hepe-Chr1:83884488 Hepe02g3214 Hepe-Chr2:81683422 1.74e-83 dispersed
Hepe02g3214 Hepe-Chr2:81683422 Hepe03g1443 Hepe-Chr3:71193598 1.06e-83 dispersed
Hepe07g1901 Hepe-Chr7:62688564 Hepe02g3214 Hepe-Chr2:81683422 7.97e-07 dispersed
Hepe05g1353 Hepe-Chr5:61943097 Hepe02g3214 Hepe-Chr2:81683422 1.47e-99 transposed
Hepe02g3214 Hepe-Chr2:81683422 Hepe08g0701 Hepe-Chr8:6320678 1.03e-31 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3214 K15121 - csv:101206140 596.275