Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g3214 | ATGAATGCGAATAGTTCTCGATTTCAGTCGTTTGGTCAGACTGAGATTAACTGGGACAAGCTTGATAAATCAAAATTTTATGGCGTAGGAGCTGGTCTCTTTACTGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAGAATGCATTGGCTGTTATTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTCGGCACTGTAATCACTGGTGCAATTCCTGCAAGGATTATCTTTCTTACCGCTTTGGAGACGATCAAAGTGGGGGCCTTTCAAATGGTTGAGCCATTGAAATTTTCTGAACCCACACAAGCGGCATTAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATCGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGCAATACAAGATATAATGGGGGTTTAGATGTCGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGTTTTCTAGGCCAAACCTCTGCTTCTGAGGAATTTGCTCCTAGCCATGCCCAACTTATTTCAGTTCAAGCAGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAGAGGGAAGACAGCAAGACAAATTGTTGAAACCTTAATCGCGGAGGATGGATGGAAAGGTTTTTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCGGCCTGGGGAACCTCGATGATAATTGCTTACGAGTACCTGAAGCGGCTGTGTGCAAAAGATGAACAGAATTGA | 966 | 44.2 | MNANSSRFQSFGQTEINWDKLDKSKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALAVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETIKVGAFQMVEPLKFSEPTQAALANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWSFLGQTSASEEFAPSHAQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDRGKTARQIVETLIAEDGWKGFYRGLGPRFFSMSAWGTSMIIAYEYLKRLCAKDEQN | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 81683422 | 81692189 | - | Hsped.02g32140.1 | Hepe02g3214 | 564715 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g3214 | 321 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 230 | 314 | IPR018108 | - | |
Hepe02g3214 | 321 | SUPERFAMILY | Mitochondrial carrier | 19 | 311 | IPR023395 | - | |
Hepe02g3214 | 321 | Gene3D | Mitochondrial carrier domain | 36 | 321 | IPR023395 | - | |
Hepe02g3214 | 321 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 10 | 320 | - | - | |
Hepe02g3214 | 321 | PRINTS | Mitochondrial carrier protein signature | 183 | 201 | IPR002067 | GO:0055085(InterPro) | |
Hepe02g3214 | 321 | PRINTS | Mitochondrial carrier protein signature | 39 | 53 | IPR002067 | GO:0055085(InterPro) | |
Hepe02g3214 | 321 | PRINTS | Mitochondrial carrier protein signature | 239 | 261 | IPR002067 | GO:0055085(InterPro) | |
Hepe02g3214 | 321 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 19 | 107 | IPR018108 | - | |
Hepe02g3214 | 321 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 122 | 210 | IPR018108 | - | |
Hepe02g3214 | 321 | FunFam | Mitochondrial substrate carrier family protein | 27 | 318 | - | - | |
Hepe02g3214 | 321 | Pfam | Mitochondrial carrier protein | 124 | 211 | IPR018108 | - | |
Hepe02g3214 | 321 | Pfam | Mitochondrial carrier protein | 30 | 106 | IPR018108 | - | |
Hepe02g3214 | 321 | Pfam | Mitochondrial carrier protein | 235 | 317 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1906 | Hepe-Chr1:83884488 | Hepe02g3214 | Hepe-Chr2:81683422 | 1.74e-83 | dispersed | |
Hepe02g3214 | Hepe-Chr2:81683422 | Hepe03g1443 | Hepe-Chr3:71193598 | 1.06e-83 | dispersed | |
Hepe07g1901 | Hepe-Chr7:62688564 | Hepe02g3214 | Hepe-Chr2:81683422 | 7.97e-07 | dispersed | |
Hepe05g1353 | Hepe-Chr5:61943097 | Hepe02g3214 | Hepe-Chr2:81683422 | 1.47e-99 | transposed | |
Hepe02g3214 | Hepe-Chr2:81683422 | Hepe08g0701 | Hepe-Chr8:6320678 | 1.03e-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g3214 | K15121 | - | csv:101206140 | 596.275 |