Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g3246 | ATGGCTTCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAAATTCCACAGCTTTTTCACCTCCTTCTCCTTCTCCTCCGGCGGAGTCTGCAATATCTCCCTCATCTCCTTCATCTTCTGAGCCAAATCAGACTGGTGAACCTCCTTCATCACCTTCTACTCCTGCAGCTCCACCTCCACAGTCACCAACAACAACAGTTCCTGATGCTCCTCCTCCTTCTCCTCCATTGTCTCCTCCTCCAGTGACAGCATCACCACCTGCAACACCAGCATCCCCACCTCCTCCTCCCTCTGCTGGTTCCTCACCTCCGCCTCCGGAATCATCGCCGTCACCGCCACCACCTTCAACGTCCTCCTCACCACCACCTTCAACTTCAACCCCACCACCACCTTCAACTTCAACATCAACCTCTCCACCACCACCTTCAACATCAACCTCTCCACCACCACCTTCAACAACATCACCACCACCTTCCTCTTCATCACAACCTCCTCCAGAGCGATCCACTGCCTCTCCTCCCCCTCCTGATTTATCGCCTCCGCCTCCGCCGCCAGCAGCAGGTGGTTCTCCACCTCCTCAATCCAGTCCTAGACCTCCATCTTCAACTCCCTCTCCCCCTCCCCCTCCCCCTGATATAATTTCATCTTCTCCTCCTCCACCATCTAAGGTCCCAACACCAGCTCCACCAACAGGAGAATCACCTAAAGTATCTCCCCCACCCCCCAAGGTTTCTCCTCCTCCTTCTGATTCTCAATCTCCACCTTTAGGTGATGCCCCTCCACCAAGATCCACAGTACCATCACCTCCTCCTTCAGTCCCTTCACCATCTGCTCCTTCTCCAGTTACTGTTCCTGGTTCTCCAACTAATTCATCTGGTGGACGTCCTGTTACCCCTCCAACTTCTGTTACACCAGAACGACCAATTCCATCAATCAATGCTACCGATGTTACAGCAAATAGCACAACCGCAGGTAATGGGGGTTTCAGCACTGGAACATCTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTATGTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCATGCCTTCTCCTTTTTCCTCCCAAAACTCAGATTCCTTATTCCTTAGGCCCCATTCTTCAGCTCCCGTGGTAGGAAGTCGTACTGATAGTGATTTCAAGTATTCGTCATCAGAAGGAGGTGGAGTAGGTAATTCAAAAGCGTTTGGTTATGAAGAGCTAAACCAGGCAACAAGTGGGTTTTCATCGAATAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAAAGGAACCCTTGCAGATGGAAGAGAAGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAGATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTCGGTTATTGTATCTCTGATTATCAAAGATTGCTTGTCTATGATTATGTTCCAAACGATACCCTTCATTACCATCTGCACGGTGCGAACAGGCCAGTTTTGGCTTGGGGAACACGTGTTCAAATTGCTGCTGGTGCAGCCCGTGGAATTGCTTACCTCCATGAAGATTGCCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTTGAAGCTCAGGTCGCAGATTTTGGGCTTGCTAAATTGGCATTGGATTCACATACTCATGTAACAACTCGTGTTATGGGAACCTTTGGATACATGGCTCCAGAATATGCAACAAGTGGAAAATTGACGGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGTAAGCCTGTAGATTCTTCTCAGCCTCTAGGGGACGAGAGCTTAGTTGAATGGGCTCGACCGTTGCTTGCACAAGCTATTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTAGACAACAATTATGTTGACAGAGAAATGTTTCGGATGATCGAAGCAGCGGGAGCTTGTGTTCGTCATTCGGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTAAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTCGCAAATGGGGTGAAACCTGGGCAAAGTGGAGTGTTTGATTCAGCTGAACATTCTGCTCAGATCAGAATGTTTCAAAGAATGGCTTTTGGCAGCCAAGATTACAGTTACGGTTATTCCAATCGAGATCAAAGTCGTAGTCGAAGTCATAGTCAAAGTCAGAGTCAGAATAGCTGGAGTAGAGAAACCAGAGATCAAAGTCCCTCGGCGCCTATTAATCGATCCCGACAATGGAACATCTGA | 2379 | 47.84 | MASSPSPSISPPENPSNSTAFSPPSPSPPAESAISPSSPSSSEPNQTGEPPSSPSTPAAPPPQSPTTTVPDAPPPSPPLSPPPVTASPPATPASPPPPPSAGSSPPPPESSPSPPPPSTSSSPPPSTSTPPPPSTSTSTSPPPPSTSTSPPPPSTTSPPPSSSSQPPPERSTASPPPPDLSPPPPPPAAGGSPPPQSSPRPPSSTPSPPPPPPDIISSSPPPPSKVPTPAPPTGESPKVSPPPPKVSPPPSDSQSPPLGDAPPPRSTVPSPPPSVPSPSAPSPVTVPGSPTNSSGGRPVTPPTSVTPERPIPSINATDVTANSTTAGNGGFSTGTSVAVGSVVGVLVLSLVIMAMWFVQKRKRRKKNIPYTMPSPFSSQNSDSLFLRPHSSAPVVGSRTDSDFKYSSSEGGGVGNSKAFGYEELNQATSGFSSNNLLGEGGFGCVYKGTLADGREVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVPNDTLHYHLHGANRPVLAWGTRVQIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAGACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEHSAQIRMFQRMAFGSQDYSYGYSNRDQSRSRSHSQSQSQNSWSRETRDQSPSAPINRSRQWNI | 792 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 82026244 | 82032422 | + | Hsped.02g32460.1 | Hepe02g3246 | 564747 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g3246 | 792 | ProSitePatterns | Protein kinases ATP-binding region signature. | 437 | 459 | IPR017441 | GO:0005524(InterPro) | |
Hepe02g3246 | 792 | MobiDBLite | consensus disorder prediction | 8 | 33 | - | - | |
Hepe02g3246 | 792 | Gene3D | Phosphorylase Kinase; domain 1 | 402 | 506 | - | - | |
Hepe02g3246 | 792 | ProSiteProfiles | Protein kinase domain profile. | 431 | 692 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g3246 | 792 | SMART | serkin_6 | 431 | 707 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g3246 | 792 | MobiDBLite | consensus disorder prediction | 50 | 285 | - | - | |
Hepe02g3246 | 792 | MobiDBLite | consensus disorder prediction | 751 | 792 | - | - | |
Hepe02g3246 | 792 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 404 | 506 | - | - | |
Hepe02g3246 | 792 | CDD | STKc_IRAK | 437 | 707 | - | - | |
Hepe02g3246 | 792 | Pfam | Protein tyrosine and serine/threonine kinase | 434 | 704 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe02g3246 | 792 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 313 | 740 | IPR047117 | - | |
Hepe02g3246 | 792 | MobiDBLite | consensus disorder prediction | 1 | 321 | - | - | |
Hepe02g3246 | 792 | FunFam | proline-rich receptor-like protein kinase PERK8 | 507 | 719 | - | - | |
Hepe02g3246 | 792 | SUPERFAMILY | Protein kinase-like (PK-like) | 414 | 704 | IPR011009 | - | |
Hepe02g3246 | 792 | Gene3D | Transferase(Phosphotransferase) domain 1 | 507 | 719 | - | - | |
Hepe02g3246 | 792 | MobiDBLite | consensus disorder prediction | 286 | 301 | - | - | |
Hepe02g3246 | 792 | MobiDBLite | consensus disorder prediction | 34 | 49 | - | - | |
Hepe02g3246 | 792 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 551 | 563 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3246 | Hepe-Chr2:82026244 | Hepe08g2594 | Hepe-Chr8:67789271 | 1.31e-148 | dispersed | |
Hepe03g0628 | Hepe-Chr3:12787815 | Hepe02g3246 | Hepe-Chr2:82026244 | 8.89e-73 | dispersed | |
Hepe07g0462 | Hepe-Chr7:4773982 | Hepe02g3246 | Hepe-Chr2:82026244 | 1.17e-67 | dispersed | |
Hepe07g1396 | Hepe-Chr7:46037783 | Hepe02g3246 | Hepe-Chr2:82026244 | 2.76e-69 | dispersed | |
Hepe08g0900 | Hepe-Chr8:8232869 | Hepe02g3246 | Hepe-Chr2:82026244 | 9.41e-73 | dispersed | |
Hepe02g0240 | Hepe-Chr2:2426213 | Hepe02g3246 | Hepe-Chr2:82026244 | 2.65e-72 | transposed | |
Hepe08g0189 | Hepe-Chr8:1711255 | Hepe02g3246 | Hepe-Chr2:82026244 | 1.69e-32 | transposed | |
Hepe10g1640 | Hepe-Chr10:53099303 | Hepe02g3246 | Hepe-Chr2:82026244 | 2.67e-124 | transposed | |
Hepe10g1608 | Hepe-Chr10:52799028 | Hepe02g3246 | Hepe-Chr2:82026244 | 3.46e-58 | transposed | |
Hepe10g1850 | Hepe-Chr10:55220573 | Hepe02g3246 | Hepe-Chr2:82026244 | 5.80e-178 | wgd | |
Hepe02g0890 | Hepe-Chr2:10655303 | Hepe02g3246 | Hepe-Chr2:82026244 | 6.75e-62 | wgd | |
Hepe02g3246 | Hepe-Chr2:82026244 | Hepe04g0667 | Hepe-Chr4:60103329 | 1.52e-60 | wgd | |
Hepe02g3246 | Hepe-Chr2:82026244 | Hepe08g0711 | Hepe-Chr8:6397764 | 5.61e-31 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72621 | PF07714 | PK_Tyr_Ser-Thr | 7.10E-45 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g3246 | - | - | - | 0.0 |