Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3250 ATGGCGGTTCCCGCGGTTCATTTCCCGATCTTCATGGCTGTCAGAGTACTCGGGATGATTGTGGCAGCTCTTGTCTTCATCTGGACCCTGCACTTCCGTGGAGGATTGTCGCTTATCTCAGACAACAAGGATCTCATCTTCAATGTCCATCCAGTTCTTATGGTGATTGGACTTGTACTTCTAAATGGAGAAGCAATGTTAGCATACAAGACAGCTTCAGGAACCAAAAACTTCAGAAAACTAGTTCATCTCGCACTACAGTTTGTTGCATTCTGTTTAAGCTTGATTGGCATATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGACAACTTTTACAGTCTGCATTCATGGTTGGGCCTACTTTCTTTCTTTCTGTTCGGCATTCAGTGGACTGCAGGATTTGTTACCTTTTGGTACCCAGGTGGCTCCAGAAACAGCCGAGTTACTCTATTGCCATGGCATGTTTTCTTCGGCGTTTACATATATGGCCTTTCCATTGCTACAGTCGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTACGCTATTCAAACGAGGCATTGCTGATAAATTCATTGGGTATCCTCATTGTTCTTCTGGGTGGTCTCGTAATTCTTGCGGTTATCGCTCCGGCAAACAGCAAAGGTGACATTTACAGAGGGCCAGCAGAATAG 699 44.64 MAVPAVHFPIFMAVRVLGMIVAALVFIWTLHFRGGLSLISDNKDLIFNVHPVLMVIGLVLLNGEAMLAYKTASGTKNFRKLVHLALQFVAFCLSLIGIWAALKFHNDKGIDNFYSLHSWLGLLSFFLFGIQWTAGFVTFWYPGGSRNSRVTLLPWHVFFGVYIYGLSIATVVTGLLEKATFLQTSKVILRYSNEALLINSLGILIVLLGGLVILAVIAPANSKGDIYRGPAE 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 82067797 82071003 + Hsped.02g32500.1 Hepe02g3250 564751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3250 232 FunFam Cytochrome b reductase 1 4 225 - -
Hepe02g3250 232 SMART 561_7 49 175 IPR006593 -
Hepe02g3250 232 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
Hepe02g3250 232 Gene3D - 2 229 - -
Hepe02g3250 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
Hepe02g3250 232 PANTHER CYTOCHROME B561-RELATED 1 225 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Hepe02g3250 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0451 Hepe-Chr1:59386661 Hepe02g3250 Hepe-Chr2:82067797 5.84e-56 transposed
Hepe02g2597 Hepe-Chr2:73145893 Hepe02g3250 Hepe-Chr2:82067797 1.63e-57 transposed
Hepe06g1255 Hepe-Chr6:62378609 Hepe02g3250 Hepe-Chr2:82067797 2.00e-67 transposed
Hepe10g1863 Hepe-Chr10:55444979 Hepe02g3250 Hepe-Chr2:82067797 4.34e-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3250 K08360 - csv:101212633 379.022