Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g3287 | ATGTCAAGAGATCAAAGAGAATTACACGTTGATGAGATAGGGAAGAAGATCAAGAGGGAATTATTTGAAGGTTTCTATCTTAATTTAATGGGAAGAAGGCACATTTTCAGTCCAACAGCAGCTGGGACATTGAATACAATAACTCCATGTGCAGCTTGTAAGCTTCTCAGAAGAAGATGTGCCCAAGAATGCCCTTTTTCTCCATATTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTCCACAAGGTTTTTGGTGCCAGCAACGTTGCTAAGATGCTCATGGAGGTACCGGAGAGTGAAAGAGCGGATGCGGCAAACAGCCTAGTTTATGAAGCCAATTTGAGGCTGAGAGATCCGGTGTACGGTTGCATGGGCGCTATTTCAGCTCTTCAACACCAAGTTCAAACTCTACAAGCTGAGCTCAATGCTATTAGAACTGAGATTATGAAGTATAAGTATAGAGAAGCCATAATCCCTTCTCCTTCTTCTTCTTCCTCTTCACACATCGTCGCTTTCATTTCCGCAACGCCGCCCGCAGCCCCGCCGACTCCGCCACATTCTCAACCTCCTCCGCTTTCTCTTCCGCCTCCTCTTCCTCCGTCGTCCTCCATCTATTCCCCGCCCATCAGTAGTACTACTGCCCCTGAATTTAACCCTATCTCAACTGAACATATTTCCTACTTCGGTTAA | 693 | 45.74 | MSRDQRELHVDEIGKKIKRELFEGFYLNLMGRRHIFSPTAAGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESERADAANSLVYEANLRLRDPVYGCMGAISALQHQVQTLQAELNAIRTEIMKYKYREAIIPSPSSSSSSHIVAFISATPPAAPPTPPHSQPPPLSLPPPLPPSSSIYSPPISSTTAPEFNPISTEHISYFG | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 82479948 | 82482054 | + | Hsped.02g32870.1 | Hepe02g3287 | 564788 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g3287 | 230 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 47 | 160 | - | - | |
Hepe02g3287 | 230 | Coils | Coil | 128 | 155 | - | - | |
Hepe02g3287 | 230 | MobiDBLite | consensus disorder prediction | 178 | 205 | - | - | |
Hepe02g3287 | 230 | Pfam | Lateral organ boundaries (LOB) domain | 49 | 145 | IPR004883 | - | |
Hepe02g3287 | 230 | ProSiteProfiles | LOB domain profile. | 48 | 149 | IPR004883 | - | |
Hepe02g3287 | 230 | MobiDBLite | consensus disorder prediction | 176 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3287 | Hepe-Chr2:82479948 | Hepe08g0630 | Hepe-Chr8:5603072 | 2.64e-49 | dispersed | |
Hepe01g0656 | Hepe-Chr1:68736318 | Hepe02g3287 | Hepe-Chr2:82479948 | 1.02e-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55174 | PF03195 | LOB | 1.50E-40 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g3287 | - | - | - | 0.0 |