Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3287 ATGTCAAGAGATCAAAGAGAATTACACGTTGATGAGATAGGGAAGAAGATCAAGAGGGAATTATTTGAAGGTTTCTATCTTAATTTAATGGGAAGAAGGCACATTTTCAGTCCAACAGCAGCTGGGACATTGAATACAATAACTCCATGTGCAGCTTGTAAGCTTCTCAGAAGAAGATGTGCCCAAGAATGCCCTTTTTCTCCATATTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTCCACAAGGTTTTTGGTGCCAGCAACGTTGCTAAGATGCTCATGGAGGTACCGGAGAGTGAAAGAGCGGATGCGGCAAACAGCCTAGTTTATGAAGCCAATTTGAGGCTGAGAGATCCGGTGTACGGTTGCATGGGCGCTATTTCAGCTCTTCAACACCAAGTTCAAACTCTACAAGCTGAGCTCAATGCTATTAGAACTGAGATTATGAAGTATAAGTATAGAGAAGCCATAATCCCTTCTCCTTCTTCTTCTTCCTCTTCACACATCGTCGCTTTCATTTCCGCAACGCCGCCCGCAGCCCCGCCGACTCCGCCACATTCTCAACCTCCTCCGCTTTCTCTTCCGCCTCCTCTTCCTCCGTCGTCCTCCATCTATTCCCCGCCCATCAGTAGTACTACTGCCCCTGAATTTAACCCTATCTCAACTGAACATATTTCCTACTTCGGTTAA 693 45.74 MSRDQRELHVDEIGKKIKRELFEGFYLNLMGRRHIFSPTAAGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESERADAANSLVYEANLRLRDPVYGCMGAISALQHQVQTLQAELNAIRTEIMKYKYREAIIPSPSSSSSSHIVAFISATPPAAPPTPPHSQPPPLSLPPPLPPSSSIYSPPISSTTAPEFNPISTEHISYFG 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 82479948 82482054 + Hsped.02g32870.1 Hepe02g3287 564788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3287 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 160 - -
Hepe02g3287 230 Coils Coil 128 155 - -
Hepe02g3287 230 MobiDBLite consensus disorder prediction 178 205 - -
Hepe02g3287 230 Pfam Lateral organ boundaries (LOB) domain 49 145 IPR004883 -
Hepe02g3287 230 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Hepe02g3287 230 MobiDBLite consensus disorder prediction 176 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3287 Hepe-Chr2:82479948 Hepe08g0630 Hepe-Chr8:5603072 2.64e-49 dispersed
Hepe01g0656 Hepe-Chr1:68736318 Hepe02g3287 Hepe-Chr2:82479948 1.02e-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55174 PF03195 LOB 1.50E-40 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3287 - - - 0.0