Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3288 ATGGCTCGAGTTTTGATTTTGACTTTGAGTTTGTTTGTGCTCCTTTTGAGCAATGCCTCAGCTCAACTTTCTACTACTTTTTACTCTTCTTCTTGTCCTAATTTGTTGTCCACTGTCAAATCCTCTGTTCGTTCTGCTGTCTCGAGTGAGGCTCGCATGGGAGCTTCCATTCTTCGCTTGTTTTTTCATGACTGTTTTGTCAATGGATGCGACGGGTCGATTTTGTTAGACGACACGTCGAGCTTCACCGGAGAGAAAAATGCAAACCCCAACAGAAACTCTGCTAGAGGCTTTGATGTCATTGATAATATCAAAACCGCTGTCGAAAAGGCTTGTCCTGGCGTTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCCCGTGACTCTATTGTTATCCTAGGAGGGCCGAGTTGGAATGTGAAATTAGGAAGAAGAGATGCGAAAACCGCGAGCCAATCCCAAGCCAACAGCGACATCCCCGGTCCAACTTCAACCCTAAGTCAACTCATCACTAGATTCAGTGCCCTCGGACTCTCCAACACCGACTTGGTCGCTCTCTCAGGCGGACACACGATTGGGCAAGCGAGGTGCGCGACGTTTAGAGGTAGAATATACAGCAACGCCACAGACATAGAGAGTTCATTTGCAAGAATAAGACAGGGGAATTGCCCCAGTGCATCAGGATCAGGAGACAACAATTTGGCTCCTTTGGATTTGCAAACTCCAAATGCTTTCGACAACAACTACTTCAAAAACCTTCTTCAAAACAAGGGCTTGCTACAATCTGATCAAGTTCTCTTCAATGGCGGATCTGCAGACTCCACTGTCCAAAATTACGCCAATGCCCCTGCCCGTTTCTTCTCTGATTTTTCTGCCGCCATGGTCCGAATGGGCGATATCAGTCCTCTTACTGGCTCTAATGGAGAAATTAGAAACAACTGCAGGAGGATTAATTAA 957 46.19 MARVLILTLSLFVLLLSNASAQLSTTFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGVVSCADILAIAARDSIVILGGPSWNVKLGRRDAKTASQSQANSDIPGPTSTLSQLITRFSALGLSNTDLVALSGGHTIGQARCATFRGRIYSNATDIESSFARIRQGNCPSASGSGDNNLAPLDLQTPNAFDNNYFKNLLQNKGLLQSDQVLFNGGSADSTVQNYANAPARFFSDFSAAMVRMGDISPLTGSNGEIRNNCRRIN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 82486076 82487666 - Hsped.02g32880.1 Hepe02g3288 564789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3288 318 FunFam Peroxidase 160 297 - -
Hepe02g3288 318 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 Pfam Peroxidase 39 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 CDD secretory_peroxidase 22 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe02g3288 318 ProSiteProfiles Plant heme peroxidase family profile. 22 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PANTHER PEROXIDASE 72-RELATED 12 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 Gene3D Peroxidase, domain 2 160 297 - -
Hepe02g3288 318 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 SUPERFAMILY Heme-dependent peroxidases 22 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3288 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Hepe02g3288 318 Gene3D - 26 318 - -
Hepe02g3288 318 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Hepe02g3288 318 FunFam Peroxidase 26 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0178 Hepe-Chr1:29443129 Hepe02g3288 Hepe-Chr2:82486076 4.55e-121 dispersed
Hepe01g0185 Hepe-Chr1:30392305 Hepe02g3288 Hepe-Chr2:82486076 2.15e-128 dispersed
Hepe02g0108 Hepe-Chr2:1300189 Hepe02g3288 Hepe-Chr2:82486076 2.13e-120 dispersed
Hepe02g3288 Hepe-Chr2:82486076 Hepe08g0689 Hepe-Chr8:6213770 5.08e-131 dispersed
Hepe02g3288 Hepe-Chr2:82486076 Hepe08g0687 Hepe-Chr8:6189940 3.52e-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3288 K00430 - csv:101218447 526.939