Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3337 ATGGCAAAGTTCAGGGACAGGACTGAAGATTTTAAAGATGTTGTGCGACATTGTGCTATTTCTTTAGGGTTTAACGAGTCCAAGTTGGCGGCTACTATGGCATCTTTCATCATTCAGAAACCTCGGCAAAGGTCACCTTTCATCAAAGCTGCTCTAAAAACGCTTGAAAGCATTGTTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACGATATTGAACAGGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAAATTGACATCCTAAAAAACAACATCAATGAGGATGAAGCACATTCAAAGGGCTGGCGTGGTGCTAGGACTGATGATGCTAATGCTGATACCATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACGTCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAACAAAGCAGTGCCAAGAAAAAAACTGAACCAAGTAAATAAACCACGTTCTGCAAATACCCCTGAATATAATAATACGGAGCTGAGGGAACCTGATAATTTTGAGCATCGACCTGTCCAAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTTATGTCTACACACGTTTTACAGCAAGCACAGCAAATTGAATTTCTTTATGAACAGGCTGTTGAAGCTACGAAGAACGTCGAGCTCGGTAATAAAGAACTTACCCAAGCAATTCAACGGAATAGCAGCAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACGTTTTCAATTATCTTTCTTGATTGCTGTTATACAACAGGAGCGAACCCATCTGCTACTTCAATTTCTCAAAGTGCCCTGCATTCATTTGTAGCTGCTGAAGCATGA 1002 40.92 MAKFRDRTEDFKDVVRHCAISLGFNESKLAATMASFIIQKPRQRSPFIKAALKTLESIVALEEFMLKHQKDYVDMYRTTDQERDDIEQEVTAFIKACQEQIDILKNNINEDEAHSKGWRGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRKKLNQVNKPRSANTPEYNNTELREPDNFEHRPVQAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSIIFLDCCYTTGANPSATSISQSALHSFVAAEA 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 82957496 82960443 - Hsped.02g33370.1 Hepe02g3337 564838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3337 333 Coils Coil 94 114 - -
Hepe02g3337 333 PANTHER SYNTAXIN-18 1 306 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Hepe02g3337 333 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
Hepe02g3337 333 SUPERFAMILY t-snare proteins 67 273 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Hepe02g3337 333 Gene3D - 206 308 - -
Hepe02g3337 333 FunFam Syntaxin-81 like 212 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3337 Hepe-Chr2:82957496 Hepe06g0203 Hepe-Chr6:7242585 6.31e-160 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3337 K08492 - csv:101207161 548.51