Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3355 ATGGCATCAATTTCCAGGCGGCTACTCCTCTTCGCGGTGGCGCTACTCGCCGCCGCACGAATCGCAACCTCCGTCACCCGATGCCCGGACTGCGGCGGAGCTGCAGTCCCCTACCCTCTGAGCACCAGCCCCACATGTGGGGACCAATCGTACAAGATCCGGTGCGACACGAGCTCACTGAAATTCGACACGCTGAACAACACGTACCCGATCATCTCGATCAACCCGTCGATCCAACGACTGGTGGTTCGCCCCTCTAACTTCCTCCCAAACACGTGCGTCACAGAGGATATCGCCCACGACGGGATCAAACTGAACAGCACTCTACCCTTCAACGTGACGAGCGGGAACACGATCCTCTACTTCAACTGCACGGATTCGCTCTTGCGCTCGCCGTTGAACTGCTCGTCGACGAGTCTGTGCCATTCGTACACCAACGGCTCGAGAGGCGCAGCGGCGTGCGAGGCGGCGCCGCTGTGCTGCACGTTTCGAGCCGGTGGGTCGTCGAATTCGTACATGATTCGGGTGAGGGAGTCGGGTTGTAGCGCGTACACGAGCTTTGTGAACTTGAATCCGGATTCGGGATTGTTGCAGTGGCCTGAACCGGGGTTGGAATTGCAGTGGCTGTTGCCGGTGGAGCCGGTTTGTAATACGCCGGCTGATTGCGATGGGAACGCCGGTTGTCGGGTTGACCCGAATGGGACCGGGTTGAGAAGGTGTCTTTGTAATTCTGGGTTCGTGTGGGACCCGGTTGCTGGGGTCTGCTCTCAAAATACGTGTCATGATCCCGATGGTTGTAAAAAGTCCTGGACTGCACTAATAGCCGGCATAGTATCCAGCGTGGTCGCGGCGGCGATCGTGTCAACAATAGCCATGTTAGTGTACAACCGGCACAGACGAGCGAAAGAAGCTCAAGAGCGTTTAACAAGGGAGCGTGAAGCAATTCTGAACTCCAACGGCGGAGCAGGAAGAGCCGCAAAGGTCTTCACTGGCAAAGAAATCAAGAGGGCCACCCACAACTTCTCCATCGACCGCCTTCTCGGTGTCGGCGGCTACGGCGAGGTCTACAAAGGCGTCATCGGCGACGGCACCAGCGTCGCCGTCAAGTGCGCCAAGCTCGGAAACGCCAAAGGCACCGACCAAGTCCTCAATGAGGTCCGAATCCTCTGCCAAGTGAACCACCGGAGCCTTGTTCGCCTCCTTGGCTGCTGCGTCGAACTAGAACAACCAATTTTGGTGTACGAGTATATCCCCAATGGCACTCTTCTCGACTATTTACAAGGTACTAATGACACGATCCCATTATCATGGGAGCAACGGCTCCGGATCGCGCAGGGTACGGCGGAGGGACTATCATACCTTCATTTCTCAGCAGTTACACCAATCTACCACCGTGACGTAAAATCCAGCAACATTCTCCTAGATGAGAAGCTGATTCCCAAAGTTGCAGATTTTGGGCTGTCGAGATTAGCCGAAACAGACCTAAGCCACATCTCAACTTGCGCTCAAGGAACTCTCGGGTACCTAGACCCGGAATACTACCGCAACTACCAGTTGACAGACAAGAGTGACGTGTATAGTTTTGGAGTGGTTTTACTGGAACTGTTGACGTCGCAAAAGGCGATCGACTTCAATAGGGAACCGGACGACGTGAACTTGGCTGTTTACGTGCAGCGGATGGTGGAGGAGGAGAAATTGGTGGATGCCATTGATCCGAGGCTGAAGAAGGGAGCGAGTGATATGGTGGTTGAGACTATGAAGGCTTTGGGATTTTTGGCATTGGGATGCTTGGAAGAGAGGAGACAGAATCGGCCTTCCATGAAAGAAGTGGTGGAGGAGATTGATTACATCATTAGCATCGCCTCTGCCAAGGTTACTTTAAGTAGTTAA 1890 54.44 MASISRRLLLFAVALLAAARIATSVTRCPDCGGAAVPYPLSTSPTCGDQSYKIRCDTSSLKFDTLNNTYPIISINPSIQRLVVRPSNFLPNTCVTEDIAHDGIKLNSTLPFNVTSGNTILYFNCTDSLLRSPLNCSSTSLCHSYTNGSRGAAACEAAPLCCTFRAGGSSNSYMIRVRESGCSAYTSFVNLNPDSGLLQWPEPGLELQWLLPVEPVCNTPADCDGNAGCRVDPNGTGLRRCLCNSGFVWDPVAGVCSQNTCHDPDGCKKSWTALIAGIVSSVVAAAIVSTIAMLVYNRHRRAKEAQERLTREREAILNSNGGAGRAAKVFTGKEIKRATHNFSIDRLLGVGGYGEVYKGVIGDGTSVAVKCAKLGNAKGTDQVLNEVRILCQVNHRSLVRLLGCCVELEQPILVYEYIPNGTLLDYLQGTNDTIPLSWEQRLRIAQGTAEGLSYLHFSAVTPIYHRDVKSSNILLDEKLIPKVADFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNREPDDVNLAVYVQRMVEEEKLVDAIDPRLKKGASDMVVETMKALGFLALGCLEERRQNRPSMKEVVEEIDYIISIASAKVTLSS 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83126701 83130303 - Hsped.02g33550.1 Hepe02g3355 564856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3355 629 Gene3D Phosphorylase Kinase; domain 1 317 416 - -
Hepe02g3355 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3355 629 Gene3D Transferase(Phosphotransferase) domain 1 417 626 - -
Hepe02g3355 629 FunFam Wall-associated receptor kinase-like 20 417 626 - -
Hepe02g3355 629 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524(InterPro)
Hepe02g3355 629 FunFam Wall-associated receptor kinase-like 20 302 416 - -
Hepe02g3355 629 CDD STKc_IRAK 347 615 - -
Hepe02g3355 629 SMART serkin_6 341 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3355 629 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3355 629 SUPERFAMILY Protein kinase-like (PK-like) 327 613 IPR011009 -
Hepe02g3355 629 Pfam Protein tyrosine and serine/threonine kinase 343 614 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3355 629 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 617 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3355 Hepe-Chr2:83126701 Hepe10g1945 Hepe-Chr10:56330880 7.19e-91 dispersed
Hepe05g0319 Hepe-Chr5:3943871 Hepe02g3355 Hepe-Chr2:83126701 7.95e-210 transposed
Hepe06g0146 Hepe-Chr6:5333945 Hepe02g3355 Hepe-Chr2:83126701 3.64e-120 transposed
Hepe02g3355 Hepe-Chr2:83126701 Hepe04g0830 Hepe-Chr4:62478820 1.23e-210 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72624 PF07714 PK_Tyr_Ser-Thr 1.10E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3355 - - - 0.0