Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3358 ATGGCCGATATTTGCTTTGTTGGAGATGGCGAACCCTCTGACGGGTCGTCAAAATCTCGTCCTCGCCGGAAAATGGAATCTGTTCAGCAGCAGAATACCGGCGCCGAACATGTCACTGCTTCTCCGCCGCCGCCACCGCCGCATAACGGACGAAAACGGCGCAGTGTGCATCAACATGTGACGGGGCCGTCCGAAAATGCAGAGGAGCTGCAGAAGAGGGTGATGAGGAATAATTATAGAATTAAATATGGAGTGACGTCTGTTTGCGGAAGGAGGAGAGAAATGGAGGATACGGTTTCGGTTCATCCTTGCTTCGCTACTTTCAAAAATCAACCCAAGATTCCTCTTCACTTTCTTGGGGTCTTCGACGGCCACGGTTGCTCTCATGTGTCAGTTTGCTGTGAGAATCGAATGCATGAGATAGTGAAGGAAGAGATTATTGGAAGGGAGTTGGGAGATGAATCGGAGGAGTGGAAGATTTTGATGCAACGAAGCTTTGGTCGTATGGACGACGAAGTCAAGGAGTATCGCCGTGATATCGATCCAAAAGACGATGCTTCCTCCAGTCTTATTACTTGCAGCTGCGAACTCCAGAACTCTCATCAATACGACACCGTTGGCTCCACCGCTCTCGTTGTCGTTGTTTCACCCGACAAATTCATCATCTCCAACTGCGGCGATTCTCGCGCCGTGCTTTGCCAGAAAACCACCGTCCTCCCTCTCTCTTCCGATCATAAGCCAGATCGGCCAGACGAGAGGTCGCGGATAGAATCCATGGGCGGTTGTGTGATATACTGGGACGGGGCGAGAGTGCTGGGAGTTTTAGCGACGTCGAGAGCGATAGGAGATGGATATCTAAAACCGTACGTGATATCAGAGCCGGAGGTCGTGGTAAGGGATCGAAGCGCGGAGGATGAGTTCATAATTATAGCGAGTGACGGTTTGTGGGACGTGATGTCTAATGAAAGTGCATGCGAGGCAGTACGAACATGCATGCGGATGCAGCGGTCGACGTCATCGGGATTGAGCCGGGGAGGCTCCGACAGAACTTGCTCGGACGCGTCCATTGTGCTCACCAAGTTGGCTATGGCCAAGCATGGTTCGGATAACATTAGCGTGGTGGTCATAGATTTGAGAAGGGATCATCATCATCATCGCAAGTAA 1164 51.29 MADICFVGDGEPSDGSSKSRPRRKMESVQQQNTGAEHVTASPPPPPPHNGRKRRSVHQHVTGPSENAEELQKRVMRNNYRIKYGVTSVCGRRREMEDTVSVHPCFATFKNQPKIPLHFLGVFDGHGCSHVSVCCENRMHEIVKEEIIGRELGDESEEWKILMQRSFGRMDDEVKEYRRDIDPKDDASSSLITCSCELQNSHQYDTVGSTALVVVVSPDKFIISNCGDSRAVLCQKTTVLPLSSDHKPDRPDERSRIESMGGCVIYWDGARVLGVLATSRAIGDGYLKPYVISEPEVVVRDRSAEDEFIIIASDGLWDVMSNESACEAVRTCMRMQRSTSSGLSRGGSDRTCSDASIVLTKLAMAKHGSDNISVVVIDLRRDHHHHRK 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83144466 83145811 - Hsped.02g33580.1 Hepe02g3358 564859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3358 387 CDD PP2Cc 81 378 IPR001932 -
Hepe02g3358 387 ProSiteProfiles PPM-type phosphatase domain profile. 82 378 IPR001932 -
Hepe02g3358 387 FunFam Protein phosphatase 2C 50 108 386 - -
Hepe02g3358 387 MobiDBLite consensus disorder prediction 1 68 - -
Hepe02g3358 387 SMART PP2C_4 72 376 IPR001932 -
Hepe02g3358 387 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169(InterPro)
Hepe02g3358 387 Pfam Protein phosphatase 2C 82 370 IPR001932 -
Hepe02g3358 387 PANTHER PROTEIN PHOSPHATASE 64 377 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g3358 387 Gene3D - 69 387 IPR036457 -
Hepe02g3358 387 SUPERFAMILY PP2C-like 73 379 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3358 Hepe-Chr2:83144466 Hepe07g0077 Hepe-Chr7:740930 3.74e-76 dispersed
Hepe01g1179 Hepe-Chr1:76947647 Hepe02g3358 Hepe-Chr2:83144466 1.09e-26 transposed
Hepe04g0840 Hepe-Chr4:62640372 Hepe02g3358 Hepe-Chr2:83144466 4.14e-56 transposed
Hepe07g0210 Hepe-Chr7:2014750 Hepe02g3358 Hepe-Chr2:83144466 1.83e-73 transposed
Hepe10g1271 Hepe-Chr10:48221924 Hepe02g3358 Hepe-Chr2:83144466 1.93e-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3358 K14497 - csv:101220425 444.891