Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3361 ATGGCCAATCGTTGGTGGACTGGAATCGATTCAAAAAACCCACAACAAGAACAAAAACCAGCTCCTCTTACCAACCCTAATTCCACCACCCAACAACATCACACTCAAATTCAACAGCATGTACCTAAGAACAACAGGCGCCCACGAGGGCGACCACCCGGCTCTAAAAACAAACCCAAGCCACCCATTGTCATCACAAAAAACACCCCCAACGCCCTCCACAGCCACGTCTTCGAAATCACCACCGCCACCGACATAGCTCACTCCATTTCCACCTTCGCCCACCGCCGCCACCTCGGCGTCTCCATTCTCAGCGGCACCGGTCTCGTCGCCAACGTCACTCTCCGCCAGCCCGCTGCTCCCGGCGGCGTCATTACCTTCCACGAACGCTTCGAGATCCTATCCCTCTCCGGCGCTTTCCTACCTGCGCCGTCCCCCTATGGAGCTACTGGGTTGACCGTGTATCTCGCCGGAGGCCAGGGGCGGGTGGTTGGCGGGCTGGTGGCAGGTCCGCTCATCGCCGCCGGCCCGGTTATAGTAATTGCAGCTTCGTTTACGAATGCGATTTTTGAAAGATTGCCGATTGAAGAAATGCAAGAAGCGGAAGATGATGGAAATAATTCAATGGGAGAAAGAGAATCAGCAGGAGGAGGAGGAGCTTTGCAAGTTTATAATCAAATTACAGAAGAAGATCATATGTTTTGGGCTCCTCTTGCTCCATCTTATTAA 729 53.36 MANRWWTGIDSKNPQQEQKPAPLTNPNSTTQQHHTQIQQHVPKNNRRPRGRPPGSKNKPKPPIVITKNTPNALHSHVFEITTATDIAHSISTFAHRRHLGVSILSGTGLVANVTLRQPAAPGGVITFHERFEILSLSGAFLPAPSPYGATGLTVYLAGGQGRVVGGLVAGPLIAAGPVIVIAASFTNAIFERLPIEEMQEAEDDGNNSMGERESAGGGGALQVYNQITEEDHMFWAPLAPSY 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83180447 83181175 + Hsped.02g33610.1 Hepe02g3361 564862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3361 242 CDD DUF296 76 185 IPR005175 -
Hepe02g3361 242 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 218 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe02g3361 242 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 186 IPR005175 -
Hepe02g3361 242 FunFam AT-hook motif nuclear-localized protein 73 202 - -
Hepe02g3361 242 MobiDBLite consensus disorder prediction 1 43 - -
Hepe02g3361 242 ProSiteProfiles PPC domain profile profile. 70 206 IPR005175 -
Hepe02g3361 242 Gene3D - 74 203 - -
Hepe02g3361 242 MobiDBLite consensus disorder prediction 1 67 - -
Hepe02g3361 242 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3361 Hepe-Chr2:83180447 Hepe05g1629 Hepe-Chr5:66159109 4.30e-67 dispersed
Hepe01g0777 Hepe-Chr1:71302353 Hepe02g3361 Hepe-Chr2:83180447 1.37e-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3361 - - - 0.0