Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g3366 | ATGTTGTCTGAGGAAATCAATAAATTTGAGTTATCTAATCTGTATGAAGCAGATGGTCAGCTCATGAATGTGGCTTATGCATTGAATTTGACAACTAAGAAACAATTAATTGGGAATTCTATGCTCTTCTTGTTGAATTGCACATGTTCCGGAATGTACCGTGTTAAGGACATGAGTTTTGTTTTTCGTGGAACAAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCTGAAAGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCGAACTCGCTTGCCTTTCTTGTCACAGTCCTTTTGTTATTCATGATATTAAACTCTCACCAGATGTCACCAAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTCTGATGGCTACAACATTAAGGATGTACGCGACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCGGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGGGGGCGTTTACAAGGGTTAAGGCTTCAACTTGCTCTACTTGATCGGGAATTCGATGATTTAGACTATGAAACTTTGAGAGCTTTGGATTCTGACAATGTTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTCCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGTGACCCTGTGAATCAGCAAGCTTCATCTTCAGAATCTAATGAGAAAAGACAAGATTCAGTTAATGCTGTTGGCGGTACTAAGACCTCAGAGGATGAACATGAACTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTGCATCAGTTCCATGCCAACTGCATAGATCCATGGCTGCGGCAGCAGGGAACGTGCCCTGTTTGTAAATTCAGAGCGGTGACCGGGTGGTCAGAACAGGGGCAAGGGGAAACCGATGCTTATATGGTTTAA | 1002 | 42.91 | MLSEEINKFELSNLYEADGQLMNVAYALNLTTKKQLIGNSMLFLLNCTCSGMYRVKDMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDPVNQQASSSESNEKRQDSVNAVGGTKTSEDEHELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVTGWSEQGQGETDAYMV | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 83211672 | 83214371 | + | Hsped.02g33660.1 | Hepe02g3366 | 564867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g3366 | 333 | SUPERFAMILY | RING/U-box | 266 | 321 | - | - | |
Hepe02g3366 | 333 | SMART | ring_2 | 272 | 312 | IPR001841 | - | |
Hepe02g3366 | 333 | MobiDBLite | consensus disorder prediction | 228 | 263 | - | - | |
Hepe02g3366 | 333 | MobiDBLite | consensus disorder prediction | 233 | 261 | - | - | |
Hepe02g3366 | 333 | CDD | RING-H2_PA-TM-RING | 271 | 313 | - | - | |
Hepe02g3366 | 333 | PANTHER | TARGET OF ERK KINASE MPK-1 | 59 | 316 | - | GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Hepe02g3366 | 333 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 247 | 318 | IPR013083 | - | |
Hepe02g3366 | 333 | Pfam | Ring finger domain | 271 | 313 | IPR001841 | - | |
Hepe02g3366 | 333 | ProSiteProfiles | Zinc finger RING-type profile. | 272 | 313 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3366 | Hepe-Chr2:83211672 | Hepe06g0897 | Hepe-Chr6:56252158 | 1.05e-10 | dispersed | |
Hepe02g3366 | Hepe-Chr2:83211672 | Hepe05g0457 | Hepe-Chr5:6040006 | 3.40e-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g3366 | K16283 | - | csv:101216306 | 488.419 |