Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3401 ATGATTTCATCGCCGGGTGGAGATGCGGAGAAGGACGCTCAAGATAACCTCTCCCTCGCCGGAGATGGCTTCGACACCGTCGTCAAGGCCAAGCAGGCCGTCGAAGCCGCCTGCCCCGGTCGAGTCTCTTGCGCCGATATATTGGCTCTCGCCGCCCGAGACGCCGTCGTCCTCGCCGGAGGCCCAAATTTCAACGTCGAATTAGGGCGCCGCGACGGCCTAATCTCCAAAGCCTCACGCGTCGACGGCAATTTACCATCCCCAAATTTCGATCTGAACGCTCTGACTTCCATCTTCGCCAAAAACGGCCTGTCCCAAACCGACATGGTCGCCCTCTCCGGCGCCCACACCATCGGCGCCTCCCACTGCAACCGCTTCGCGGACCGCCTCTTCTCCTCCTCCGGCGTCGATCCGTCGCTAAATTCAGGCTATGCCGAACAGTTAAAGCAAGCCTGCCCTCGGAATGTGGACCCGGGCGTCGTCGTCCAGCTAGATCCGACGACTCCGAACACGTTCGACAACGTGTATTACCGGAATCTGATGGAGGGGAAAGGACTGTTGAAATCGGATGAGACTCTGTTCACGAGCTCGGCGTCGAAGGCGACGGTGGTGGGATTTGCGAATAACGGAGGGCAGTTCAATGCGGCGTTTGGGGAGGCGATGAGGAAGCTGGGGAGAGTGGGAGTTAAGACGGGAAGAGCTGGAGAGATAAGGAGAGATTGTAGCTCCTTCAATTAA 738 58.54 MISSPGGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGRVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNALTSIFAKNGLSQTDMVALSGAHTIGASHCNRFADRLFSSSGVDPSLNSGYAEQLKQACPRNVDPGVVVQLDPTTPNTFDNVYYRNLMEGKGLLKSDETLFTSSASKATVVGFANNGGQFNAAFGEAMRKLGRVGVKTGRAGEIRRDCSSFN 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83473967 83475030 + Hsped.02g34010.1 Hepe02g3401 564902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3401 245 PRINTS Plant peroxidase signature 107 119 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Plant peroxidase signature 60 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Plant peroxidase signature 179 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Plant peroxidase signature 219 232 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Plant peroxidase signature 41 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Plant peroxidase signature 22 35 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 SUPERFAMILY Heme-dependent peroxidases 6 245 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 Gene3D Peroxidase, domain 2 86 224 - -
Hepe02g3401 245 ProSiteProfiles Plant heme peroxidase family profile. 1 245 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PANTHER - 1 245 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 FunFam Peroxidase 86 224 - -
Hepe02g3401 245 Pfam Peroxidase 7 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Haem peroxidase superfamily signature 42 59 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 PRINTS Haem peroxidase superfamily signature 60 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3401 245 CDD secretory_peroxidase 3 244 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe02g3401 245 Gene3D - 4 245 - -
Hepe02g3401 245 ProSitePatterns Peroxidases proximal heme-ligand signature. 108 118 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3401 Hepe-Chr2:83473967 Hepe02g3403 Hepe-Chr2:83485157 7.71e-119 dispersed
Hepe10g1144 Hepe-Chr10:45352442 Hepe02g3401 Hepe-Chr2:83473967 2.42e-08 dispersed
Hepe02g3401 Hepe-Chr2:83473967 Hepe02g3402 Hepe-Chr2:83480169 6.85e-115 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3401 K00430 - csv:101213343 427.172