Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3403 ATGGGATTTATTTGGAGGGCTTTGGTCTTGTGTGTGATTCTGGCGGCGACGGCGGAGAGAGGAGAGGGCCAATTAGCAAAGAATTTTTACGGCGGAAGTTGCCCGAACGTGGAGCAAATAGTTAAACAATCTGTTCAAAACAAGTTTATTCAGACCTTCGTTACAATCCCTGCAACTTTGCAACTATTCTTCCATGATTGCTTTGTTGAGGGATGCGATGCTTCGGTATTAATAGCATCAGCAGATGGGGATGCAGAGAAGGATGCATCAGACAACATTTCATTGGCAGGAGATGGATTTGACACCATTGTTAAAGCAAAACAAGCTGTTGAAGCTGTTTGCCCCAACCTTGTCTCTTGTGCTGACATATTAGCTCTTGCAACTAGGGATGTTGTTGTCTTGGCGGGAGGCCCAGAATACAGCGTGGAATTGGGCCGCCGAGATGGGCTCATTTCTAAAGCATCCCGAGTGCCCGGAAACCTGCCGGAACCATCCTTCAATCTGAACCAACTGACCACCATGTTCGCCGCCCACAATCTGACCCTCATCGACGTAATCGCACTCTCCGGGGCCCACACCTTGGGCTTCTCCCACTGCAAACGTTTCGCCGACCGACTCTACTCGTTTTCCCCTTCGTCTCCGGTGGACCCATCGCTGGATCCCACTTACGCCCAACAGCTTATGCAGGTCTGTCCGAGGAACGTCGATCCCAGCGTGGCCATCGATATGGATCCTCTAACCCCTCGAACCTTCGACAACGTTTACTACCAGAACCTTGTCGCCGGGAAGGGGCTGTTCACTGCCGACCAGGTTCTGTTTACGGAGTCCAAATCGCAGCCGACGGTCCTCGACTTTGCCAAGAATGGGGCAGAGTTTAATGCAGCGTTTGTCAGAGCAATGACGAAGTTGGGTCGAGTCGGGGTTAAGACTGGCAAGAAGGGTGAAATTCGAAGGGATTGTACTACCTTTAATTCCTAA 978 50.82 MGFIWRALVLCVILAATAERGEGQLAKNFYGGSCPNVEQIVKQSVQNKFIQTFVTIPATLQLFFHDCFVEGCDASVLIASADGDAEKDASDNISLAGDGFDTIVKAKQAVEAVCPNLVSCADILALATRDVVVLAGGPEYSVELGRRDGLISKASRVPGNLPEPSFNLNQLTTMFAAHNLTLIDVIALSGAHTLGFSHCKRFADRLYSFSPSSPVDPSLDPTYAQQLMQVCPRNVDPSVAIDMDPLTPRTFDNVYYQNLVAGKGLFTADQVLFTESKSQPTVLDFAKNGAEFNAAFVRAMTKLGRVGVKTGKKGEIRRDCTTFNS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83485157 83487518 + Hsped.02g34030.1 Hepe02g3403 564904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3403 325 PANTHER - 10 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 Gene3D Peroxidase, domain 2 162 303 - -
Hepe02g3403 325 FunFam Peroxidase 28 170 - -
Hepe02g3403 325 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe02g3403 325 Gene3D - 28 324 - -
Hepe02g3403 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 FunFam Peroxidase 162 303 - -
Hepe02g3403 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 Pfam Peroxidase 41 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g3403 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Hepe02g3403 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3401 Hepe-Chr2:83473967 Hepe02g3403 Hepe-Chr2:83485157 7.71e-119 dispersed
Hepe02g3403 Hepe-Chr2:83485157 Hepe04g1303 Hepe-Chr4:68627512 8.80e-147 dispersed
Hepe02g3402 Hepe-Chr2:83480169 Hepe02g3403 Hepe-Chr2:83485157 6.48e-195 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3403 K00430 - csv:101213580 533.872