Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3404 ATGGGTCGCTGTAATGACAAATTTGTCGCCTTTTTGAACAATAGATGGTTGGTTTTTGTCGCTGCAATTTGGGTTCAATCTTGCGCTGGAGTTGGGTATCTTTTCGGCAGCATTTCGCCCGTGATCAAAACCAATTTGAGTTACAATCAACGCCAAATCGCCCGCCTCGGTGTCGCTAAGGACCTTGGCGACAGCGTTGGCATTTTGGCCGGAACTTTGTCGGAGATTTTGCCCTTTTGGGCTACTTTGTTGGTCGGTGCTATCAATAACTTTGTCGGCTATGGTTGGCTTTGGCTCATCGTCACTGGTCGAGCTCCTGTTTTGCCTCTTTGGGCTATGTGCGCTCTTGTATTTGTGGGAACGAACGGGGAGACTTACTTCAATACAGTTTCTCTGGTTTCTGGCGTACAAAACTTTCCGAAAAGCAGGGGTCCTGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCGGATTCAGCCAATCTTATATTCATGATTGCAGTTGGTCCTGCACTGGTGGCTATTGGTATGATGTTTTTTATCAGACCTGTCGCCGGTCATCGACAAGTAAGGCCGTCCGATGCCATGAGCTTTAGTAGTGTTTATGGTGTTTGCCTCCTTTTGGCTGCATATTTGATGGGAGTCATGCTTATTGAGGATCTTGTAACCTTGAGCCCCACTGTGATAGCCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACTCCCTTTTTGATTCCTGTGACGTTGGCTTTTAGCTCGGAGACGACAACATATCCTGAGCAAGAGGCTCTCCTACAACAGTCAGAGAAACAGGAACCTGCTAGATCCGAACCAGATGGTCATGAAGTGATATTTAGTGAGGTGGAAGACGAAAAATCGGAGGGAGAGGACTTACTTCCTGCATTAGAGAGACAAAAACGCATTGCTCAGTTGCAAACTAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAATCAAGAGGACCAAGGGTCCACATAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAGGCAGACTTTTGGCTTATATTTGTCTCCCTTCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGACAACCTTGGACAGATGAGCCAGTCTCTAGGTTATGATAACACACATATTTTTGTATCCCTGATCAGCATTTGGAACTTTCTCGGCCGTGTTGGTGGTGGATACTTCTCTGAGATTGTTGTGAGAGATTATGCTTATCCAAGACCCGTTGCAATGGCGATCGCGCAGTTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGGGCAATGTACATTGGGACTCTCATAATGGGGCTCGGGTACGGGGCTCACTGGGCAATCGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCCTCACCCTCTCAAATCCTATGGGATCTCTAATATTTTCTGGCTTAATTGCAAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCATCTCTCACATCTGCAGAGCTCATCATCGCTTTGGTTCAGCGGACTTTCCGCCGAGGGACCGCACAAGTGCGTCGGTGCCGTATGTTTCTTTCTCACTTGTATGATAATGGCTGTATTCTGTGCTATTGCAGGCATGTTAAGTTTGATTTTGGTGTATCGAACAAAGGGTGTTTACCACAACCTCTACGGAAAATCTCGTACGTCGACGCTTTCGTAG 1791 45.95 MGRCNDKFVAFLNNRWLVFVAAIWVQSCAGVGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGILAGTLSEILPFWATLLVGAINNFVGYGWLWLIVTGRAPVLPLWAMCALVFVGTNGETYFNTVSLVSGVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPALVAIGMMFFIRPVAGHRQVRPSDAMSFSSVYGVCLLLAAYLMGVMLIEDLVTLSPTVIAIFTAVMFVILLTPFLIPVTLAFSSETTTYPEQEALLQQSEKQEPARSEPDGHEVIFSEVEDEKSEGEDLLPALERQKRIAQLQTKLLQAAAEGAVRIKRTKGPHRGEDFTLGQALIKADFWLIFVSLLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYFSEIVVRDYAYPRPVAMAIAQFLMIFGHVFIGMGWPGAMYIGTLIMGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSNPMGSLIFSGLIASSIYDSEAEKQAHNHLSHLQSSSSLWFSGLSAEGPHKCVGAVCFFLTCMIMAVFCAIAGMLSLILVYRTKGVYHNLYGKSRTSTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83488846 83492136 - Hsped.02g34040.1 Hepe02g3404 564905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3404 596 SUPERFAMILY MFS general substrate transporter 212 582 IPR036259 -
Hepe02g3404 596 CDD MFS_Mch1p_like 15 568 - -
Hepe02g3404 596 SUPERFAMILY MFS general substrate transporter 9 202 IPR036259 -
Hepe02g3404 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 584 - GO:0016020(PANTHER)
Hepe02g3404 596 Pfam Nodulin-like 15 262 IPR010658 -
Hepe02g3404 596 Gene3D MFS general substrate transporter like domains 359 582 IPR036259 -
Hepe02g3404 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0433 Hepe-Chr2:4182015 Hepe02g3404 Hepe-Chr2:83488846 1.21e-36 dispersed
Hepe02g1321 Hepe-Chr2:16722662 Hepe02g3404 Hepe-Chr2:83488846 5.18e-112 dispersed
Hepe02g3404 Hepe-Chr2:83488846 Hepe05g0285 Hepe-Chr5:3502717 3.44e-102 dispersed
Hepe02g3404 Hepe-Chr2:83488846 Hepe08g0281 Hepe-Chr8:2535787 1.76e-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3404 - - - 0.0