Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3423 ATGGTTCTGGTTCTACTGGAGATTTTCTTTGTTTTCATTGTGAGCAACCATTTTTCATTTGTGTCTGCTCTGAATGAAGAGGGATTAGCTCTACTTTCCTTCAAAAACTCGACTTTTGACGCTGAAGGCTTTCTCCAAAACTGGAACTCCTCTGATGCGACCCCGTGTTCGTGGAATGGAATCACTTGCACAGAACAAAGAGTTGTCTCTCTCAGTATTGCAGACAAGAAACTCTCTGGTACTCTCCATCCTGCACTTGGGAAACTTGTGTCACTCCGCCATTTAAGCCTCCGAAACAACAAGCTTTTCGGAAGCTTCCCAACTGAGCTCTGCAACTTAGTAGAGTTACAAAGCTTGGACCTCTCACAAAATGACTTTAATGGTTCTATCCCAGATGGGTTTGGATCCCACTCGACTTCTCTTCAGAATCTCAATATTTCCTTCAATGTGATCCACGGTTTGATCCCTGCAGGCTTTGGCAACTTGTCCAACTTGCAAGGTACGCTTGATTTGTCTCACAATGTCTTTACCGGTCCAATCCCGCTGAGCCTAAGCAGCCTCCCTGCAACCCTTTACATGGATCTCAGTTACAATAATCTCAGTGGCTCAATACCACCACAAGAAGTTTTCCAGAACCTTGGACCAACGGCTTACATAGGCAATGTCTTTCTATGTGGACTTCCCCTCAATGTTTCATGTCCATCCATAGTGCCAACGTCAAACCCCAACTCGTGGTTCCATTGCCCATCACATGGGAAAGGTGGAAAATCTTGCTCCATAATCACAGCTTCTGCAAGTATCATAGTTGGATTCTGCCTGGTTATCCTGGTGGTTTTTTGGTGCAAGAGAGCTTATCCTCCTAAAGGGAGTGAAAATCTAGATGGCTGCAACTTCAGAGAGACATTGATGTTTAAAACAGAGTTTTCTTGCTTTGCAAAATATGAAGTTGAGCCCCTACCAGAAAACATGGAGAAGTACAACTTTGTGCTACTGGATCGGCAAGTCGACTTCGATCTCGAGCAACTTTTGAAAGCATCAGCTTATCTTCTAGGCAAGAATGGGAATGGGATTGTGTATAAAGTGGTTCTAGAGAAAGAACTAAAGCTAGCTGTGAGAAGATTGGAAGATGGAGCTTATGAAAGGTTTAAAGAGTTCCAAACAGAAGTTGAAGCAATTGGGAAAGTCAGACATCCAAATATTGTAGCTCTTTTAGCTTACTGCTGGTCTGTTGAAGAGAAGCTGCTCATACATGAATTCATACCACAGGGAGACCTGGCCACTGCGATTCATGGGAAAGCAGAAATTTCCCACTTCAGACCACTTTCTTGGGCTGATCGAGTGAAAATCATGAAAGGAATAGCAAAGGGATTGACATACCTTCACGAATTCAGTCCAAGAAAATACGTCCACGGCGATCTGAAGCCGACCAACATTCTGCTCGGAAACAACATGGAACCCTACATCTCAGATTTCGGACTCGGACGACTAGCAAATGCCGCCGGAGAATTGACCGCCTCACCATCGGATCGATCCGCCGCCGCAACGCCGCGGCACTCTCCGTTCCGATCAAACTCAATGTGCTCCTCTCTGTCGATAGGGTCCTATTATCAGGCTCCCGAAGCCATGAAGGCGGCAAAGGCATCGCAGAAGTGGGATGTTTACTCATTCGGTGTGATATTACTGGAAATTATCACCGGGAAGTTGCCGGTGATTCAAGCGGGTTCGTCGGAGATGGAGATGGTTCAATGGATTCAACTTGGAATTGATGAAGGGAAGCGGCCATCGTGTATGATAGATCCGTCAATGGGGGAGGAGGAAGTGGAGAAGGAAGAAGCTGCGGCGGCCATTGAAATAGCTGTTGCTTGCACTCGGAAGAGCCCTGAGAAGAGACCCTCTATGAGAATTGTCTCTGAATGTTTGGAAAAATTGGCAACTTCATCGTACTGA 1947 45.76 MVLVLLEIFFVFIVSNHFSFVSALNEEGLALLSFKNSTFDAEGFLQNWNSSDATPCSWNGITCTEQRVVSLSIADKKLSGTLHPALGKLVSLRHLSLRNNKLFGSFPTELCNLVELQSLDLSQNDFNGSIPDGFGSHSTSLQNLNISFNVIHGLIPAGFGNLSNLQGTLDLSHNVFTGPIPLSLSSLPATLYMDLSYNNLSGSIPPQEVFQNLGPTAYIGNVFLCGLPLNVSCPSIVPTSNPNSWFHCPSHGKGGKSCSIITASASIIVGFCLVILVVFWCKRAYPPKGSENLDGCNFRETLMFKTEFSCFAKYEVEPLPENMEKYNFVLLDRQVDFDLEQLLKASAYLLGKNGNGIVYKVVLEKELKLAVRRLEDGAYERFKEFQTEVEAIGKVRHPNIVALLAYCWSVEEKLLIHEFIPQGDLATAIHGKAEISHFRPLSWADRVKIMKGIAKGLTYLHEFSPRKYVHGDLKPTNILLGNNMEPYISDFGLGRLANAAGELTASPSDRSAAATPRHSPFRSNSMCSSLSIGSYYQAPEAMKAAKASQKWDVYSFGVILLEIITGKLPVIQAGSSEMEMVQWIQLGIDEGKRPSCMIDPSMGEEEVEKEEAAAAIEIAVACTRKSPEKRPSMRIVSECLEKLATSSY 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83612214 83614333 - Hsped.02g34230.1 Hepe02g3423 564924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3423 648 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 132 IPR050647 -
Hepe02g3423 648 Gene3D Transferase(Phosphotransferase) domain 1 420 647 - -
Hepe02g3423 648 SMART serkin_6 344 640 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3423 648 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 24 168 - -
Hepe02g3423 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3423 648 Gene3D Phosphorylase Kinase; domain 1 316 419 - -
Hepe02g3423 648 SUPERFAMILY L domain-like 26 229 - -
Hepe02g3423 648 Pfam Leucine rich repeat 140 200 IPR001611 GO:0005515(InterPro)
Hepe02g3423 648 SUPERFAMILY Protein kinase-like (PK-like) 349 642 IPR011009 -
Hepe02g3423 648 Gene3D Ribonuclease Inhibitor 138 235 IPR032675 -
Hepe02g3423 648 Gene3D Ribonuclease Inhibitor 27 137 IPR032675 -
Hepe02g3423 648 Pfam Leucine Rich Repeat 116 136 IPR001611 GO:0005515(InterPro)
Hepe02g3423 648 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515(InterPro)
Hepe02g3423 648 Pfam Protein kinase domain 350 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3423 648 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Hepe02g3423 648 ProSiteProfiles Protein kinase domain profile. 344 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2677 Hepe-Chr2:74475455 Hepe02g3423 Hepe-Chr2:83612214 8.06e-104 dispersed
Hepe02g3423 Hepe-Chr2:83612214 Hepe10g1528 Hepe-Chr10:52008438 1.42e-97 dispersed
Hepe01g1165 Hepe-Chr1:76776293 Hepe02g3423 Hepe-Chr2:83612214 1.63e-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72627 PF00069 Pkinase 1.40E-35 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3423 - - - 0.0