Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3428 ATGACTTCGCAAAATTCAATGAATTCCAGATTGTTTCCGTTTCCTGTTTTTCGCATTTGTTTGCCTTTCTTGCTCATGATTCCGGCGATCTCTCTTGCTTCCCCTGCTTATGCTTATGATGATTATGAATGGTTCTTAAACTGCAAAGATCCAGATTCGTTGAACTGCGAGAGTATTACTCCATTTCCTCTCTGGAGATTTAACGAAACAGTGAAGAATTGTGGTTATCCTGGTGAGTTGATGAAGCTCAATTGCGAAGGAGACCGTGCAACCATACAAATGTTGGGAGCAAAATACAAGCTCCTGGGGTTTAATTTTACTTTTAGTATCACAGATCAAATTCTTATAATAGCTGAAATTGACTCATCAGTTTCAGATCCATTTTGTTCTCCAAAACAACAACATACTCCGTCAAATTCCATCCTTGCCATTATTCCTGTATATAATAGTGACTGCAGCCAACCTACTTGTTCTGCTCCATATTGTCCTTTCAGTATACTAGTGCCAATTTCACCATCCTTGTTAGAAGAACTTGGTGCTGATGATTGGCAAAATGTAGCGCACCAGATCTTAGCAAAGTTTAATAACTCTGCTCGGAACCTACTCGTCGGTCAAGCATGTACAAATTGCAGTGTTTCCGCTGATTATTGTGGTTATGACTTGGAATTGAATCAAACAAAATGCTACTGCCAATCTTCCTCTAATGGGTTTGAAGATTGTCCTTCCTCCCCCTATGCTGAAGCGCCAACAAAAGCTCAACTGCCAAAAACAGAACCTGCCGCCTCCGACAATACAAAGAAGCCTAAGAAAACAACACCCCTTGTAATTGCATTAGGTGTTTCAATTGGAGGAGCATGTTTGGTTGCAACAATTTTAGGATGCTGCTTTTTTTACTGTTTGAGAAGAAAGAAGAAACATCCAATTGGTTCTATAACCAAAGAAGGCCATTCTCCTCCTGTTTCTGATCCTCTTTCAAACAAAGATATATCACCTCCTCCCCTAATTTTAAACTCCTTATATCAGACTCACAGCATTCCTTCTTATCCCTCTTCCAAATCTGACCTTGAGAGAGCTAGCACCAACCATGACATTCAAGTATTCAACTATGCTGAACTCGAAAAAGCTACCGATAATTTTAACAGTTCTCGAGAGCTTGGTGATGGAGGATTTGGCACTGTTTACTATGGGAAGCTTGTGGATGGGCGTAAAGTTGCTGTGAAGCGTCTCTATGAACATAACTGCAAACGTGTAGAACAGTTCTTAAATGAAGTGGACATCCTTGCTCATTTACAACACAAGAACCTTGTCAAACTCTATGGCTGCACCTCCAGATTTAGCCAAGGCCTTCTCCTTGTCTACGAATACATTCCCAACGGAACCGTAGCCGACCATCTTCACGGATCGCGGGCAAATTTTGGTTTGCTCAGTTGGCCAATTCGGTTGCGAATCGCCACCGAAACGGCGAATGCGCTCGCATACCTCCATCGCTCCGAAATCATCCACCGGGACGTCAAAACCAACAATATTCTCCTTGACAACAACTTCATTGTCAAAGTGGCTGATTTTGGCCTTTCAAGGCTGTTTCCTACTGATGTAACTCATGTGTCCACTGCCCCACAAGGCACACCGGGGTATGTCGATCCTGAGTACTATCAATGTTATCAACTCACTACGAAGAGCGACGTATACAGCTTTGGAGTGGTTTTGATCGAGCTTTTATCGTCTCTAAGAGCAGTCGACACAGATAGAAAACGACATGATATCAATTTGAGCAATATGGCAGTGAGTAGAATACAAAGTGGGGCATTGAATGAGTTGATCGATCCAAAGCTCGGGTTCGACAAGAATCATGAAGTTATGAGGGAGATAACATTAGTTGCGGAGTTGGCTTTTCGCTGCCTTCAACAGGAAAGGGACATGAGGCCTTCAATGGAAGAAGTGGTGGAAGTACTAAGGGAGATTGAGAATGATCAATCCAGTTCCGGGATGGCTAAAGTTGTTGATATAGGAGTCGTTGGAGACGATACCGAGCTCACGAAGAGAACGCCGCCCTCCTTTTCGCCGAATTCTGTCATAGCTAACAATTGGGTTAACAGCTCTTCCACCACAAATTCCTTGTGA 2121 42.76 MTSQNSMNSRLFPFPVFRICLPFLLMIPAISLASPAYAYDDYEWFLNCKDPDSLNCESITPFPLWRFNETVKNCGYPGELMKLNCEGDRATIQMLGAKYKLLGFNFTFSITDQILIIAEIDSSVSDPFCSPKQQHTPSNSILAIIPVYNSDCSQPTCSAPYCPFSILVPISPSLLEELGADDWQNVAHQILAKFNNSARNLLVGQACTNCSVSADYCGYDLELNQTKCYCQSSSNGFEDCPSSPYAEAPTKAQLPKTEPAASDNTKKPKKTTPLVIALGVSIGGACLVATILGCCFFYCLRRKKKHPIGSITKEGHSPPVSDPLSNKDISPPPLILNSLYQTHSIPSYPSSKSDLERASTNHDIQVFNYAELEKATDNFNSSRELGDGGFGTVYYGKLVDGRKVAVKRLYEHNCKRVEQFLNEVDILAHLQHKNLVKLYGCTSRFSQGLLLVYEYIPNGTVADHLHGSRANFGLLSWPIRLRIATETANALAYLHRSEIIHRDVKTNNILLDNNFIVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYYQCYQLTTKSDVYSFGVVLIELLSSLRAVDTDRKRHDINLSNMAVSRIQSGALNELIDPKLGFDKNHEVMREITLVAELAFRCLQQERDMRPSMEEVVEVLREIENDQSSSGMAKVVDIGVVGDDTELTKRTPPSFSPNSVIANNWVNSSSTTNSL 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83656455 83663796 - Hsped.02g34280.1 Hepe02g3428 564929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3428 706 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 52 701 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Hepe02g3428 706 CDD TM_EGFR-like 272 306 - -
Hepe02g3428 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3428 706 Gene3D Transferase(Phosphotransferase) domain 1 456 674 - -
Hepe02g3428 706 Gene3D Phosphorylase Kinase; domain 1 350 455 - -
Hepe02g3428 706 ProSiteProfiles Protein kinase domain profile. 379 654 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g3428 706 CDD STKc_IRAK 385 654 - -
Hepe02g3428 706 Pfam Protein tyrosine and serine/threonine kinase 382 651 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g3428 706 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524(InterPro)
Hepe02g3428 706 SUPERFAMILY Protein kinase-like (PK-like) 362 655 IPR011009 -
Hepe02g3428 706 MobiDBLite consensus disorder prediction 248 268 - -
Hepe02g3428 706 FunFam Wall-associated receptor kinase-like 20 456 664 - -
Hepe02g3428 706 SMART serkin_6 379 651 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0947 Hepe-Chr2:11446527 Hepe02g3428 Hepe-Chr2:83656455 9.10e-192 dispersed
Hepe02g3428 Hepe-Chr2:83656455 Hepe09g0357 Hepe-Chr9:3149055 1.88e-144 dispersed
Hepe01g1169 Hepe-Chr1:76830752 Hepe02g3428 Hepe-Chr2:83656455 1.55e-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72628 PF00069 Pkinase 4.90E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3428 - - - 0.0