Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g3473 ATGGCCCTCTCTCTCCTCTATTCTCCTTCTTCCTCTCATCTTTCCTGGCTTAGGCCTTTTCTCCTCGGAACCAAGCCTGGATCTCCCCTGCCCCTGCCTGCGCCTGAAAATGCTCTCCTCGACGACCAACCACCACACAACCACAACCAAATGGCCAATGCCTTTGCCTTTTGCCCGCCTCCTAACAAGTTGAGGAAGAGACCTGGAAAGCTTCTCGTCCCGGAATATTGTCCCGGACCTGAATTTACCAAACTCAGGAACAAAATGGACAATCAGGAATTCCATGTCCAGGGCAGAGATTACTGTTTGGCAACCAAGAAAGGAAGGCGTGAAACGCTGGAAGATGCCTATGGAGTCATGCTTGATCTTTTCGGAGATTCCAAACAGGCTTTCTTCGCTGTAGTCGACGGCCATGGCGGTCGCGATGCAGCGGATTACGTCGTTAATAATTTGGGGAAGAACATCGTAAACGCTCTTGAAAAAATTGCTGGAGACGACCAAGAGAACGCAATCGAATCGGCGATTCGCAGAGGTCACAAACGCACCGACGAGGAGTTTCTTAGTCAGGGCGTCGGCAGTGGAGCCTGTGCAGCGAGCGTGCTGGTGAAAGACGGCGAGCTTCACGTCGCCAATGTCGGAGATTGTCGAGTCGTGTTGAGCAGAAACGGCGTAGCGACGCCATTGACGAAGCAACACCGCCTGTGTCGAGAAGACGAGCGCCAACGGATTGAGAATTCGGGAGGATTTGTGGACTACAAAAATGGAGTGTGGAGAGTTCAGGGTTCGCTTGCGGTGTCGAGAGCCATTGGAGACCTGCATTTGAAAGAATGGGTGATTTCAGAGCCTGAAATTCATCGTCTTCCTCTAACTCCTGATTGTGAGTTCTTGATAATGGCGTCCGATGGACTGTGGGATAAGGTAAAAGATCAGGAGGCAGTGGATGAAGTGATGAGGGAAATGGGAAGGAAGGAAGAGGAAGAGGAAGAGGCAATGAAGGCATGCAAAATGCTAATGGAAATGTCATTCGGAAGGGGGAACAGGGATGATGTCACAGTCATGGTGGTTCATCTTCGCCACTTCTTCATTTCCATTTAG 1095 50.68 MALSLLYSPSSSHLSWLRPFLLGTKPGSPLPLPAPENALLDDQPPHNHNQMANAFAFCPPPNKLRKRPGKLLVPEYCPGPEFTKLRNKMDNQEFHVQGRDYCLATKKGRRETLEDAYGVMLDLFGDSKQAFFAVVDGHGGRDAADYVVNNLGKNIVNALEKIAGDDQENAIESAIRRGHKRTDEEFLSQGVGSGACAASVLVKDGELHVANVGDCRVVLSRNGVATPLTKQHRLCREDERQRIENSGGFVDYKNGVWRVQGSLAVSRAIGDLHLKEWVISEPEIHRLPLTPDCEFLIMASDGLWDKVKDQEAVDEVMREMGRKEEEEEEAMKACKMLMEMSFGRGNRDDVTVMVVHLRHFFISI 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 84027039 84029013 - Hsped.02g34730.1 Hepe02g3473 564974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g3473 364 Pfam Protein phosphatase 2C 105 349 IPR001932 -
Hepe02g3473 364 ProSiteProfiles PPM-type phosphatase domain profile. 100 357 IPR001932 -
Hepe02g3473 364 SMART PP2C_SIG_2 115 357 IPR001932 -
Hepe02g3473 364 FunFam Probable protein phosphatase 2C 74 97 360 - -
Hepe02g3473 364 SUPERFAMILY PP2C-like 99 358 IPR036457 -
Hepe02g3473 364 Gene3D - 96 360 IPR036457 -
Hepe02g3473 364 PANTHER PROTEIN PHOSPHATASE 92 356 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g3473 364 SMART PP2C_4 92 355 IPR001932 -
Hepe02g3473 364 Coils Coil 313 333 - -
Hepe02g3473 364 CDD PP2Cc 99 357 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3473 Hepe-Chr2:84027039 Hepe10g1335 Hepe-Chr10:49448469 3.70e-82 dispersed
Hepe02g3473 Hepe-Chr2:84027039 Hepe08g2470 Hepe-Chr8:65762522 3.54e-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g3473 K17506 - rcu:8277160 410.994