Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0022 ATGGATGATGAACATGTCCGCATTGATGATCTGTCTGCCCACCTCAGATCTATGTTCAAGTGTTCTATGCCTAATGGTTTCTATGCTGTTTTTGATGGTCACGGAGGGCCTCACGCAGCTGCTTTTGTCAAGAGGAATGTCCTGAGATTATTCTTTGAAGACGCTGATTGGTTAAAAATGAGGGATATTGATTCTATTTCTTGGAAAGATATGGAGAATTCCCATCGCAAATCGTTTCAACTTGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTAGCAGCTCGTGTGGGACAACTGCGTTGACGGCATTGGTTCTCGGAAGGCATTTGCTTGTTGCAAACGCTGGTGACTGCCGAGCAGTCCTATGTAGGAAAGGTGTAGCAGTTCCAATGTCTCAAGATCACAGGCCTTCTAATTTACTCGAGCTCAAGCGTGTGGAAGGGATGGGTGGGTTCGTAGACGATGGGTACGTGAATGGGTATATTTCAGTAACAAGAACCTTGGGGGATTGGGACCTGAAATTGCCAAATAGCTCCTCATCACCTCTGATTGCTGAGCCACAAGTGGAGCATGTTATTTTAACGAAGGAGGACGAGTTCTTGATCCTTGGCTGTGATGGGATTTGGGATGTTATGTCAAGTCAATATGCTGTCAGTCTTGTACGACGCGGGTTGCGGAAGCACGACGACCCTCATCAAAGCTCACGAGAATTAGTCGTGGAAGCTTTGCGCCTCAACACATCGGATAATCTTACTGCAATTGTAATCTGCTTTTCTTCTCCAGGCTGCGTTCCTCAGCAGCAAATATGGAATTCGTGTAGTCTGACAGAAGAAGCTAGAAGTAGATTGAGAAGCTTGTTAGAAGGAAACTGA 873 45.82 MDDEHVRIDDLSAHLRSMFKCSMPNGFYAVFDGHGGPHAAAFVKRNVLRLFFEDADWLKMRDIDSISWKDMENSHRKSFQLADLALADEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGVAVPMSQDHRPSNLLELKRVEGMGGFVDDGYVNGYISVTRTLGDWDLKLPNSSSSPLIAEPQVEHVILTKEDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHDDPHQSSRELVVEALRLNTSDNLTAIVICFSSPGCVPQQQIWNSCSLTEEARSRLRSLLEGN 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 251469 255473 + Hsped.03g00220.1 Hepe03g0022 565020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0022 290 Gene3D - 1 261 IPR036457 -
Hepe03g0022 290 PANTHER PROTEIN PHOSPHATASE 2C 1 258 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe03g0022 290 FunFam Probable protein phosphatase 2C 22 1 261 - -
Hepe03g0022 290 ProSiteProfiles PPM-type phosphatase domain profile. 9 258 IPR001932 -
Hepe03g0022 290 Pfam Protein phosphatase 2C 1 250 IPR001932 -
Hepe03g0022 290 SMART PP2C_SIG_2 3 258 IPR001932 -
Hepe03g0022 290 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169(InterPro)
Hepe03g0022 290 SMART PP2C_4 3 256 IPR001932 -
Hepe03g0022 290 CDD PP2Cc 13 258 IPR001932 -
Hepe03g0022 290 SUPERFAMILY PP2C-like 19 260 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0022 Hepe-Chr3:251469 Hepe08g2470 Hepe-Chr8:65762522 1.17e-73 dispersed
Hepe03g0294 Hepe-Chr3:3957600 Hepe03g0022 Hepe-Chr3:251469 2.03e-09 transposed
Hepe03g0022 Hepe-Chr3:251469 Hepe03g1809 Hepe-Chr3:75003845 2.61e-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0022 K14803 - csv:101207477 531.176