Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0036 ATGAAAGCATCGTATGGAGGGGACGAAAACCAGCCTCCGTACGGCTACAGCACACCCACTATCTGCACCGAGGCAGAAGCCATCATCTTCTCTTGGGTCCAAACCGCCATGTTTCAGGACTCCCGAATGGCTGCATCTCTACTTCGACTTCATTTCCACGACTGTTTTGGGTGCGATGCATCGGTGTTGTTGGATGACAATGACAACTTTGTAGGTGAAAAAACTGCAGCTCCAAATGTGAACTCCCTAAGAGGATTTGAAGTGATTGATGCAATCAAATCTGAGATCGAATCTGTTTGCCCACAGACAGTTTCATGTGCTGACATTCTAGCAATTGCAGCCAGAGATTCTGTTGTACTATCAGGAGGACCCGGTTGGAAAGTGGAATTTGGAAGAGGAGATAGCCTAAGTGCAAGCAAAGCAGCAGCACAAAACAACATTCCTGCCCCAAACTCCACTGTTGCCATTCTCGTTTCTAAGTTCCAAAACCTTGGCCTTTCTCTCAGAGATATGGTTGCTCTCTCAGGGGCGCACACACTGGGAAGAGCTCGATGCGTTACGTTCAGTTCTAGGCTGCAAGCCAACGGAGACAGCCCCAACGAAGGAGCAAACCAAGAGTTCATCCAGTCGCTAAAACAGCTCTGCTCAGAATCTGGTAGCAGCTCGACACTGGCACAGCTCGACCTTGCAACCCCGGTGACATTCGACAACCAGTATTACATTAATCTTCTCTCCGGAGAAGGGTTGCTCCAGTCTGATCAGGTTCTTGCAACTGGGGATTACCAGACGAGGGAAATAGTCGAAACCTATGCTGTCGACCCAATGGCCTTCTATGAAGACTTCAAGCAATCAATGGTGAAAATGGGAAGCCTCAAGCCACCCACTGGAACACAGGCCATGATCCGAACTAACTGTCGAACTATAAGCTAG 930 48.82 MKASYGGDENQPPYGYSTPTICTEAEAIIFSWVQTAMFQDSRMAASLLRLHFHDCFGCDASVLLDDNDNFVGEKTAAPNVNSLRGFEVIDAIKSEIESVCPQTVSCADILAIAARDSVVLSGGPGWKVEFGRGDSLSASKAAAQNNIPAPNSTVAILVSKFQNLGLSLRDMVALSGAHTLGRARCVTFSSRLQANGDSPNEGANQEFIQSLKQLCSESGSSSTLAQLDLATPVTFDNQYYINLLSGEGLLQSDQVLATGDYQTREIVETYAVDPMAFYEDFKQSMVKMGSLKPPTGTQAMIRTNCRTIS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 394458 395633 - Hsped.03g00360.1 Hepe03g0036 565034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0036 309 FunFam Peroxidase 16 156 - -
Hepe03g0036 309 Pfam Peroxidase 32 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 SUPERFAMILY Heme-dependent peroxidases 20 307 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PANTHER PEROXIDASE 72-RELATED 20 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 Gene3D Peroxidase, domain 2 148 289 - -
Hepe03g0036 309 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 169 181 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 122 137 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 84 97 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 103 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 ProSiteProfiles Plant heme peroxidase family profile. 16 309 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 ProSitePatterns Peroxidases proximal heme-ligand signature. 170 180 IPR019793 -
Hepe03g0036 309 PRINTS Haem peroxidase superfamily signature 122 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Haem peroxidase superfamily signature 104 121 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g0036 309 Gene3D - 21 308 - -
Hepe03g0036 309 ProSitePatterns Peroxidases active site signature. 44 55 IPR019794 GO:0004601(InterPro)
Hepe03g0036 309 FunFam Peroxidase 148 288 - -
Hepe03g0036 309 CDD secretory_peroxidase 22 306 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0036 Hepe-Chr3:394458 Hepe04g1554 Hepe-Chr4:71086778 1.16e-94 dispersed
Hepe03g0036 Hepe-Chr3:394458 Hepe07g0701 Hepe-Chr7:8393147 5.21e-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0036 K00430 - csv:101205763 528.865