Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0037 | ATGGAGAATAAGAAGAAAGAATTAGAGTTAATAAAGAGAGAGAAAAATTGGAATTCTTCAATGGCAAATTCTGGTTTGTTATTCTCCGATGCGATTCCCTGCTTCGACTTTCCGATGGATGACTCCTCCTTTAAGGCTTCTACCTTCTTGGATTTGTTGCAACTCCATGATTACACCCCTTCTTTATTCGACCTCTTTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCGTCTTCCTCCGCCGTGCCGGACTCATCTGAGGTTTTCAATACTCCTCCTACCCCCAACTCCCCCTCCGTCTCTTGCTCCTCTAACGAAAGAGTTTTGGACGCCGTCGATGAACTTGATCGCGATAAATCGCCTTTCAACAAACAGTTGAAAGCGAAAAAGAAGAATCAAAAAAGGGGAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTCGACGACGGATACAGATGGAGAAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCAAGAAGTTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCGACGACCCTTCCGTCGTCGTCACCACCTACGAAGGCCAACACAACCATCAAAGCCCAATCATGCCACGTGGATCAGCCCTCTCCGCCGCCGCCGCTGCTGCCGCCTTCCCGCAACCGCCGCCGCTTGTGTTCCCACACCCGCAGCAATACACGTACACTCCGGCGCCGCCTATGGGGGGATTTGATCCGGTGTATCATAGTTTTGGAAATCAAGAACGACATCGTATTGGGGGATCCTCCTCTTCTAATTCTGATTCTTTCAAAGACCATGGCCTTCTACAAGATATGATCGTACCGTCCTCCTCCTCCTTACACATCCCCAAACAAGAGTAA | 909 | 49.72 | MENKKKELELIKREKNWNSSMANSGLLFSDAIPCFDFPMDDSSFKASTFLDLLQLHDYTPSLFDLFSPPPPPPPPPSSSAVPDSSEVFNTPPTPNSPSVSCSSNERVLDAVDELDRDKSPFNKQLKAKKKNQKRGREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHNHQSPIMPRGSALSAAAAAAAFPQPPPLVFPHPQQYTYTPAPPMGGFDPVYHSFGNQERHRIGGSSSSNSDSFKDHGLLQDMIVPSSSSLHIPKQE | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 425163 | 427328 | - | Hsped.03g00370.1 | Hepe03g0037 | 565035 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0037 | 302 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 87 | 218 | IPR044810 | GO:0003700(InterPro) | |
Hepe03g0037 | 302 | Pfam | WRKY DNA -binding domain | 152 | 209 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 108 | 124 | - | - | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 265 | 281 | - | - | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 288 | 302 | - | - | |
Hepe03g0037 | 302 | ProSiteProfiles | WRKY domain profile. | 146 | 211 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 64 | 138 | - | - | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 260 | 302 | - | - | |
Hepe03g0037 | 302 | FunFam | WRKY transcription factor 57 | 137 | 211 | - | - | |
Hepe03g0037 | 302 | SUPERFAMILY | WRKY DNA-binding domain | 143 | 211 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 81 | 105 | - | - | |
Hepe03g0037 | 302 | SMART | WRKY_cls | 151 | 210 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g0037 | 302 | MobiDBLite | consensus disorder prediction | 64 | 80 | - | - | |
Hepe03g0037 | 302 | Gene3D | WRKY domain | 135 | 212 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0037 | Hepe-Chr3:425163 | Hepe04g1972 | Hepe-Chr4:74567774 | 3.47e-45 | dispersed | |
Hepe05g2012 | Hepe-Chr5:70670353 | Hepe03g0037 | Hepe-Chr3:425163 | 1.92e-14 | dispersed | |
HepeContig66g0148 | Hepe-ChrContig66:11912492 | Hepe03g0037 | Hepe-Chr3:425163 | 1.74e-13 | dispersed | |
Hepe10g0586 | Hepe-Chr10:7122456 | Hepe03g0037 | Hepe-Chr3:425163 | 1.19e-43 | transposed | |
Hepe02g1159 | Hepe-Chr2:14423808 | Hepe03g0037 | Hepe-Chr3:425163 | 2.82e-46 | wgd | |
Hepe03g0037 | Hepe-Chr3:425163 | Hepe03g1824 | Hepe-Chr3:75216308 | 8.47e-50 | wgd | |
Hepe03g0037 | Hepe-Chr3:425163 | Hepe05g1368 | Hepe-Chr5:62322167 | 3.72e-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55190 | PF03106 | WRKY | 6.80E-27 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0037 | - | - | - | 0.0 |