Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0037 ATGGAGAATAAGAAGAAAGAATTAGAGTTAATAAAGAGAGAGAAAAATTGGAATTCTTCAATGGCAAATTCTGGTTTGTTATTCTCCGATGCGATTCCCTGCTTCGACTTTCCGATGGATGACTCCTCCTTTAAGGCTTCTACCTTCTTGGATTTGTTGCAACTCCATGATTACACCCCTTCTTTATTCGACCTCTTTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCGTCTTCCTCCGCCGTGCCGGACTCATCTGAGGTTTTCAATACTCCTCCTACCCCCAACTCCCCCTCCGTCTCTTGCTCCTCTAACGAAAGAGTTTTGGACGCCGTCGATGAACTTGATCGCGATAAATCGCCTTTCAACAAACAGTTGAAAGCGAAAAAGAAGAATCAAAAAAGGGGAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTCGACGACGGATACAGATGGAGAAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCAAGAAGTTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCGACGACCCTTCCGTCGTCGTCACCACCTACGAAGGCCAACACAACCATCAAAGCCCAATCATGCCACGTGGATCAGCCCTCTCCGCCGCCGCCGCTGCTGCCGCCTTCCCGCAACCGCCGCCGCTTGTGTTCCCACACCCGCAGCAATACACGTACACTCCGGCGCCGCCTATGGGGGGATTTGATCCGGTGTATCATAGTTTTGGAAATCAAGAACGACATCGTATTGGGGGATCCTCCTCTTCTAATTCTGATTCTTTCAAAGACCATGGCCTTCTACAAGATATGATCGTACCGTCCTCCTCCTCCTTACACATCCCCAAACAAGAGTAA 909 49.72 MENKKKELELIKREKNWNSSMANSGLLFSDAIPCFDFPMDDSSFKASTFLDLLQLHDYTPSLFDLFSPPPPPPPPPSSSAVPDSSEVFNTPPTPNSPSVSCSSNERVLDAVDELDRDKSPFNKQLKAKKKNQKRGREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHNHQSPIMPRGSALSAAAAAAAFPQPPPLVFPHPQQYTYTPAPPMGGFDPVYHSFGNQERHRIGGSSSSNSDSFKDHGLLQDMIVPSSSSLHIPKQE 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 425163 427328 - Hsped.03g00370.1 Hepe03g0037 565035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0037 302 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 218 IPR044810 GO:0003700(InterPro)
Hepe03g0037 302 Pfam WRKY DNA -binding domain 152 209 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe03g0037 302 MobiDBLite consensus disorder prediction 108 124 - -
Hepe03g0037 302 MobiDBLite consensus disorder prediction 265 281 - -
Hepe03g0037 302 MobiDBLite consensus disorder prediction 288 302 - -
Hepe03g0037 302 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe03g0037 302 MobiDBLite consensus disorder prediction 64 138 - -
Hepe03g0037 302 MobiDBLite consensus disorder prediction 260 302 - -
Hepe03g0037 302 FunFam WRKY transcription factor 57 137 211 - -
Hepe03g0037 302 SUPERFAMILY WRKY DNA-binding domain 143 211 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe03g0037 302 MobiDBLite consensus disorder prediction 81 105 - -
Hepe03g0037 302 SMART WRKY_cls 151 210 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe03g0037 302 MobiDBLite consensus disorder prediction 64 80 - -
Hepe03g0037 302 Gene3D WRKY domain 135 212 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0037 Hepe-Chr3:425163 Hepe04g1972 Hepe-Chr4:74567774 3.47e-45 dispersed
Hepe05g2012 Hepe-Chr5:70670353 Hepe03g0037 Hepe-Chr3:425163 1.92e-14 dispersed
HepeContig66g0148 Hepe-ChrContig66:11912492 Hepe03g0037 Hepe-Chr3:425163 1.74e-13 dispersed
Hepe10g0586 Hepe-Chr10:7122456 Hepe03g0037 Hepe-Chr3:425163 1.19e-43 transposed
Hepe02g1159 Hepe-Chr2:14423808 Hepe03g0037 Hepe-Chr3:425163 2.82e-46 wgd
Hepe03g0037 Hepe-Chr3:425163 Hepe03g1824 Hepe-Chr3:75216308 8.47e-50 wgd
Hepe03g0037 Hepe-Chr3:425163 Hepe05g1368 Hepe-Chr5:62322167 3.72e-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55190 PF03106 WRKY 6.80E-27 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0037 - - - 0.0